Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g1013 ATGATCGCCGGCCGAATTTTTGGGCCGCCGCGCACTATGCTCACTGTTTTGTTTTTCCTCTGCCTTGTTACTTCATCTCATTCAAATGAGGTTGAATCACTTATGAAGTTTAAGTCCTATATCCAAAGTTCAAATGGCAATGTTTTCAGTTCTTGGATACAAGCAAATTCTCCATGCAACTTCACAGGGATTGTTTGCAACACCAATGGTTTTGTCTCAGAAATCAACCTTGCACAGAAAAAGCTAGCTGGTACTCTTCCTTTTGATTCAATTTGCGCGCTTCAATCGCTTGAAAAAATCTCTTTCGGGTCAAATTTCTTGCATGGCAGCATAAGTGAGGAGTTGAGGAATTGCAAAAACTTGAAGTACTTGGATTTGGCAGGGAATTCATTTACAGGAACAGTACCTTATTTGTCAAGTTTGAACAACTTGGAGTACTTGAACTTAAATGCAAGTGGAATCTCTGGAGCATTTCCATGGAAATCATTGGAAAATCTAACAAGTGTCACTTTCTTGAGCCTTGGTGATAACTTGTTTGAAAAAACTCCTTTCCCTTTGGAGATCTTAAAGCTTGAAAATTTGTATTGGCTTTACTTATCAAATTGCAGCATCACTGGGAATATTCCATTGGGTATTGGAAATCTTTCTCAGCTTCAAAATCTTGAGCTTTCTGATAATTATCTGCATGGTGAAATTCCTGCTGATATTGCAAAACTTCACAAGCTATGGCAACTTGAGCTTTATGACAATAATTTGAGTGGGAAATTTCCAATTGGATTTGGCAACCTTACCAATCTAGTCAACTTTGATGCTTCTAACAATGATCTTGAAGGTGATCTTTCTGAGTTAAGGTCCTTAACAAACCTTGCATCACTGCAGCTTTTTCAGAATCATCTCTCAGGAGCAATTCCACAAGAGTTTGGAGATTTCAAAAACCTTACTGAAATCTCTCTTTATGATAACAAATTCACAGGTTCGCTTCCACAAAACCTTGGCACTTGGAAAGGCTTGGACTACATAGATATTTCAGATAATTCATTTTCTGGTCATATACCACCTGACATGTGCAAGAACAACAGAATAGATGAGCTAGCATTGTTGAACAACAGCTTCACTGGAAGTATACCGGAAACATATGCGAATTGCACGTCTTTGAAACGCTTTCGCCTTAGTCAGAATTCACTTTCAGGTGTCGTTCCTTTGGGTATATGGAGCTTGCCAAATCTGAAACTTATAGATTTCTCAATGAACAAGTTTGAAGGTCCAATAACATCTGATATTGGTAAAGCAAAATCTCTTGCTCAACTGTTTTTATCTGACAATCAATTCTCAGGTGAGTTACCTTCGGAAATCTCAGAAGCTTCTTCGTTGGTATCTATTCAGTTAAGTTCAAATCAAATTTCTGGTCACATACCAGAAATGATTGGAAAATTGAAGAAACTAACTAGTCTTGATTTGGATAATAACAACCTTTCTGGTCTTATACCATACTCTATTAGTTCTTGTATTTCTCTTTATGAAATAAACCTTGCTTGTAACTCTCTATATGGAGAAATACCACCTAGTATTGGGTCTCTACCTTCCCTCAACTCATTGAACTTATCCTCCAATAAACTTTCTGGTGAAGTTCCACCAAGTTTATCGCCTCATTCGCTTAGCGTTCTTGATTTGTCAAACAACAATTTGGTTGGTCCAATACCAGATCCACTTGATATTTCAGCTTTCAGAGATGGATTCATGGGAAATCCTGGCTTATGCAGTCATATTTTGAAGAATTTCATGCCATGTTCAATGGAATCAGGAAGGTCCAATACACACAGAAACCTTCTGCTATGTTTGATGGCTGCTTTAATACTTATGCTTCTTTCTTCAGCATATTTCCTCTTCATGAAACTGAACATCAACAAGATTGAGAAGCCACTCAAGACTACTTCTTGGGATGTCAAGCAATACCACAGGCTAAACTTCGATGAGAATGAAGTTATCCAAGGGATCAAGGCTGAGAATTTGATCGGCAGCGGAGGATCAGGGAATGTTTACAAGATTGTACTTAAAAACGGCGTGGAATTCGCAGTGAAACACATATGGACTTCAAATCAAAGTGACCGCGGAAGTTGCAGGAGCAGTTCGGCTATGCTGAAAGGGAGTTCAAAGTCACCTGAGTTTGATGCAGAAGTGGCTACTCTAAGTTCCATAAGGCATGTGAATGTGGTGAAGCTCTATTGTAGCATCACAAGTGAAGATAGTAACCTTCTTGTTTACGAGTTGTTACCGAATGGAAGTTTGTGGGACAGGTTGCACACAAGTAGTAAGAAGACAAAGATGATGGGGTGGGAGGTAAGGTATGACATAGCAGTTGGTGCTGCTAGAGGATTGGAGTACCTGCATCATGGGTATGATAGAGCAGTTATACACAGGGATGTGAAGTCTAGTAACATATTGCTTGATGAGGAATGGAGGCCAAGGATTGCTGATTTTGGACTTGCCAAGATTGTGCAAGGTGGTGCAGCCAATTGGACCAATGTCATTGCTGGAACACTTGGATACATGGCTCCTGAGTATGCCTACACTGTTAAGGTGACAGAGAAGAGTGATGTTTACAGTTTTGGAGTAGTCCTAATGGAGTTGGTAACAGGGAAGAGGCCTATTGAGGCAGAGTTTGGAGAAAACAAGGACATTGTGTATTGGGTATGCAACAATATGTGGAGAAACAAAGAAAATGATATTGTTGAATTGGTTGATTCAACCATTGCAAAACATTTCAAAGAAGATGCAATGAAGGTGTTGAGAATAGCAACATTATGCACTTCCAAAATCCCATCCTCAAGACCATCAATGAGAAGGGTAGTTCAAATGCTGGAAGAGGCAGAACCTTGTACTATATCCAACATAATTGTGACTATAAATGATTGA 2913 0.392 MIAGRIFGPPRTMLTVLFFLCLVTSSHSNEVESLMKFKSYIQSSNGNVFSSWIQANSPCNFTGIVCNTNGFVSEINLAQKKLAGTLPFDSICALQSLEKISFGSNFLHGSISEELRNCKNLKYLDLAGNSFTGTVPYLSSLNNLEYLNLNASGISGAFPWKSLENLTSVTFLSLGDNLFEKTPFPLEILKLENLYWLYLSNCSITGNIPLGIGNLSQLQNLELSDNYLHGEIPADIAKLHKLWQLELYDNNLSGKFPIGFGNLTNLVNFDASNNDLEGDLSELRSLTNLASLQLFQNHLSGAIPQEFGDFKNLTEISLYDNKFTGSLPQNLGTWKGLDYIDISDNSFSGHIPPDMCKNNRIDELALLNNSFTGSIPETYANCTSLKRFRLSQNSLSGVVPLGIWSLPNLKLIDFSMNKFEGPITSDIGKAKSLAQLFLSDNQFSGELPSEISEASSLVSIQLSSNQISGHIPEMIGKLKKLTSLDLDNNNLSGLIPYSISSCISLYEINLACNSLYGEIPPSIGSLPSLNSLNLSSNKLSGEVPPSLSPHSLSVLDLSNNNLVGPIPDPLDISAFRDGFMGNPGLCSHILKNFMPCSMESGRSNTHRNLLLCLMAALILMLLSSAYFLFMKLNINKIEKPLKTTSWDVKQYHRLNFDENEVIQGIKAENLIGSGGSGNVYKIVLKNGVEFAVKHIWTSNQSDRGSCRSSSAMLKGSSKSPEFDAEVATLSSIRHVNVVKLYCSITSEDSNLLVYELLPNGSLWDRLHTSSKKTKMMGWEVRYDIAVGAARGLEYLHHGYDRAVIHRDVKSSNILLDEEWRPRIADFGLAKIVQGGAANWTNVIAGTLGYMAPEYAYTVKVTEKSDVYSFGVVLMELVTGKRPIEAEFGENKDIVYWVCNNMWRNKENDIVELVDSTIAKHFKEDAMKVLRIATLCTSKIPSSRPSMRRVVQMLEEAEPCTISNIIVTIND* 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g1013 970 Gene3D Transferase(Phosphotransferase) domain 1 757 964 - -
Lan19g1013 970 Gene3D Ribonuclease Inhibitor 282 363 IPR032675 -
Lan19g1013 970 Gene3D Ribonuclease Inhibitor 364 453 IPR032675 -
Lan19g1013 970 Gene3D Ribonuclease Inhibitor 184 281 IPR032675 -
Lan19g1013 970 Gene3D Ribonuclease Inhibitor 27 183 IPR032675 -
Lan19g1013 970 SUPERFAMILY L domain-like 345 568 - -
Lan19g1013 970 Gene3D Ribonuclease Inhibitor 454 596 IPR032675 -
Lan19g1013 970 Gene3D Phosphorylase Kinase; domain 1 648 756 - -
Lan19g1013 970 SUPERFAMILY Protein kinase-like (PK-like) 656 954 IPR011009 -
Lan19g1013 970 SMART serkin_6 665 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g1013 970 Pfam Protein kinase domain 668 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g1013 970 ProSitePatterns Protein kinases ATP-binding region signature. 671 693 IPR017441 GO:0005524
Lan19g1013 970 SMART LRR_typ_2 286 309 IPR003591 -
Lan19g1013 970 SMART LRR_typ_2 215 239 IPR003591 -
Lan19g1013 970 SMART LRR_typ_2 526 550 IPR003591 -
Lan19g1013 970 SMART LRR_typ_2 478 501 IPR003591 -
Lan19g1013 970 SMART LRR_typ_2 310 334 IPR003591 -
Lan19g1013 970 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Lan19g1013 970 Pfam Leucine Rich Repeat 480 502 IPR001611 GO:0005515
Lan19g1013 970 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 10 963 - -
Lan19g1013 970 PANTHER RECEPTOR-LIKE PROTEIN KINASE HAIKU2 10 963 - -
Lan19g1013 970 PRINTS Leucine-rich repeat signature 481 494 - -
Lan19g1013 970 PRINTS Leucine-rich repeat signature 526 539 - -
Lan19g1013 970 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672|GO:0006468
Lan19g1013 970 SUPERFAMILY L domain-like 66 422 - -
Lan19g1013 970 ProSiteProfiles Leucine-rich repeat profile. 480 501 IPR001611 GO:0005515
Lan19g1013 970 ProSiteProfiles Protein kinase domain profile. 665 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g1013 Lan-Chr19 17423531 17427837 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g1013 14 967 Receptor kinase-like Gene Family AT1G09970 55.775 0.0 1045
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan19g1013 Pkinase 3.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g1013 - - gmx:100811489 1397.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g1013 19 17423531 17427837 Lan16g0091 16 732493 736366 LSH