Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g1010 ATGGCTTCTCGTAACCAGAATAGGCCTCCTCGCAGCCCCAACACTTTACAGAGAAAGGTAGGTACAGAAGAAATTCCTTTAGACAAGCGTAGAAGAATTGTAGGGGCACGAGGAAGGGATCCATTTGGTGTAATCAGTAACAAGCCGGAGGATGTCGCGAATGCCGAAGGCTCCGAATGTAGCACTGTTGTTGTTGACTTCACTAGTGAGGAAGTTGAGGCACTGCTTAATCAGAGAATGAAAAAGGGGAATTCTTATGATAAGAAAGAAATGGACCATAGGGCAGATCTTGTTAAGCGTTTAAAACTTTGCGTTCGATGGTATAAAAGGGTTGAAGAAGGGTATATCCAGGAAAAGGAAAAGCTTCGGATTGAACTTCAATCTGCTGAGAAGAAGTGCATTGACACTGAGACCGAGATGAAGAATAAGATAGAGGAGTTGAATGAGACCATAACTAATCTGAGGATGACAATTTCCTCTTTAGAAGAGAGAATTGCAAAGGAAGAATCAGATAAATTGGAAGCTATAGATTGTTATAGAAAAGAAAAGGAAGCCAGAAGTGTGGCTGAGAAGTTGCAAGCTTGTCTTTCAACTGAGCTCGAGAAAGTCCGAGATGAGAAATCAGCTGCTGAGCGGAAGGCTATTTCAAATGAGGATTTGTACAAGAGATCACAAGAGTATAATATGAGTCTGCAGCAGTATAATAGTCGCCTTCAGTCAGACCTAGAAACAACTAATGAAGCACATAAACGACTGGAAACAGAGAAAGCTACCATTGTTGAGAATCTCAGCAATGTAAGGGCCCACAATAAAGCGTTGCAGGATCAGTTGTCATCTCTTAAGGCCTCACAGGATGACATTACAAAGCAGAAGGAGATGTTGGTAAATGACACGAGTTGCCTTCGGGAAGAATTAAAACAAATTAGAGATGATCGTGATCGTCAACTAGGACAAGTGCAAACTTTAGCTGAAGAAGTATCAAAATACAAAGAATATACAGGGAAATCAGTTGCCCAATTGGATACCTTGACAATTAAAACAAATGCTCTTGAGGAGACATGTTCTTATCAGAGGGAGGAAATACTTAAGCTGCAGCAGCAACTGATTGCTGAAAAGGAGAAATCAAAGATGGCTAACTTATCTGCTTCCGAAACTAGAATAGTGTTTGAAGATCAGCAAAGAACCATACATGAATTACAAGAAAGATTAGCAGATAAAGAATTCCAAGTAATTGAAGGAGAGAAATTAAGGAAAAAGTTGCATAACACTATACTGGAGCTAAAAGGAAATATTCGTGTGTTCTGTCGGGTGCGTCCCTTACTACCAGATGATGCTACTGGAATGGACATGGTTGTTTCTTACCCTACGTCAACAGAAGCTCATGGCCAGAGCATTGATTTGATACAAAGTGGGCAGAAGTATCCATTTACATTTGACAAGGTATTCAATCATGATGCTTCTCAGCAGGATGTTTTCACAGAGATATCACAGTTGGTACAGAGTGCACTTGATGGGTACAAGGTCTGCATATTTGCTTATGGGCAGACAGGTTCAGGCAAGACATACACAATGATGGGTAGACCTGATGCTCCCGATCTGAAAGGGTTGATACCACGTTCTCTTGAACAGATATTCCAGATTAGCCAGTCCCTTAAAAATCAAGGGTGGAAGTACAAAATGCAGGCTTCAATACTTGAAATATATAATGAGACCATCAGGGATTTGTTAGCAAATCGGTCCAGTGGTATTGACCCAACGCGAACAGAAAATGGTGTCCCTGGAAAGCAGTACACTATTAAACACGACGCTAATGGAAATACGCATGTTACAGACCTCACCGTAGTGGATGTTTGTAGTGTAAATGAGATTTCCTCCCTCCTGCAGAAGGCTGCACAAAGCAGGTCAGTGGGAAGAACGCAGATGAATGAGCAGTCATCACGAAGCCACTTTGTCTTTACTTTGCGTATATGCGGGACTAACGAGAACACTGAACAACAAGTGCAAGGTGTGTTAAATTTGATTGATCTAGCTGGAAGTGAAAGACTGTCAAGGAGTGGGGCAACTGGGGACCGTTTGAAGGAAACTCAGGCTATCAACAAAAGTCTTTCCTCTTTGAGTGATGTTATATTTGCATTGGCAAGGAAAGAGGAGCATGTTCCTTTCAGGAATTCAAAACTGACATACCTTCTCCAACCATGCCTTGGTGGGGATTCCAAAACTCTGATGTTTGTGAACATCTCACCTGATCCATCTTCAACCGGCGAGTCACTTTGTTCTCTTCGATTTGCTGCCAGAGTAAACGCCTGTGAGATTGGCATTCCGCGGCGTCAGACATCTACAAAGTCCTTTGATTCTTCTCGTTTGAGCTATGGCTAA 2376 0.4196 MASRNQNRPPRSPNTLQRKVGTEEIPLDKRRRIVGARGRDPFGVISNKPEDVANAEGSECSTVVVDFTSEEVEALLNQRMKKGNSYDKKEMDHRADLVKRLKLCVRWYKRVEEGYIQEKEKLRIELQSAEKKCIDTETEMKNKIEELNETITNLRMTISSLEERIAKEESDKLEAIDCYRKEKEARSVAEKLQACLSTELEKVRDEKSAAERKAISNEDLYKRSQEYNMSLQQYNSRLQSDLETTNEAHKRLETEKATIVENLSNVRAHNKALQDQLSSLKASQDDITKQKEMLVNDTSCLREELKQIRDDRDRQLGQVQTLAEEVSKYKEYTGKSVAQLDTLTIKTNALEETCSYQREEILKLQQQLIAEKEKSKMANLSASETRIVFEDQQRTIHELQERLADKEFQVIEGEKLRKKLHNTILELKGNIRVFCRVRPLLPDDATGMDMVVSYPTSTEAHGQSIDLIQSGQKYPFTFDKVFNHDASQQDVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDAPDLKGLIPRSLEQIFQISQSLKNQGWKYKMQASILEIYNETIRDLLANRSSGIDPTRTENGVPGKQYTIKHDANGNTHVTDLTVVDVCSVNEISSLLQKAAQSRSVGRTQMNEQSSRSHFVFTLRICGTNENTEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALARKEEHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSTGESLCSLRFAARVNACEIGIPRRQTSTKSFDSSRLSYG* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g1010 791 Coils Coil 235 290 - -
Lan19g1010 791 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 390 767 IPR027417 -
Lan19g1010 791 ProSiteProfiles Kinesin motor domain profile. 430 769 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan19g1010 791 SMART kinesin_4 428 777 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan19g1010 791 PRINTS Kinesin heavy chain signature 505 526 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan19g1010 791 PRINTS Kinesin heavy chain signature 639 656 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan19g1010 791 PRINTS Kinesin heavy chain signature 670 688 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan19g1010 791 PRINTS Kinesin heavy chain signature 719 740 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan19g1010 791 PANTHER KINESIN-LIKE PROTEIN 3 791 - -
Lan19g1010 791 MobiDBLite consensus disorder prediction 1 24 - -
Lan19g1010 791 MobiDBLite consensus disorder prediction 1 19 - -
Lan19g1010 791 Coils Coil 389 409 - -
Lan19g1010 791 Coils Coil 305 325 - -
Lan19g1010 791 ProSitePatterns Kinesin motor domain signature. 669 680 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lan19g1010 791 Gene3D Kinesin motor domain 375 771 IPR036961 -
Lan19g1010 791 Coils Coil 193 213 - -
Lan19g1010 791 Coils Coil 112 171 - -
Lan19g1010 791 PANTHER KINESIN-LIKE PROTEIN KLP-3 3 791 - -
Lan19g1010 791 Pfam Kinesin motor domain 436 767 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan19g1010 791 CDD KISc_C_terminal 428 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g1010 Lan-Chr19 17398752 17404563 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g1010 402 781 Calmodulin-binding Proteins AT5G65930 39.267 4.39e-79 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g1010 K10405 - gmx:100808278 1230.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g1010 19 17398752 17404563 Lan16g0100 16 774158 779726 LSH
Lan18g0605 18 11065860 11072057 Lan19g1010 19 17398752 17404563 PCT
Lan19g1010 19 17398752 17404563 Lan18g0605 18 11065860 11072057 PCT