Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g1009 ATGGCACAGAAGCAGAAACGCCCTTCCCCTCACGATGTTCCACCGTCCGTTTCTTCCGATGATGAACCAATCCCTTCATCTCAACCCGAATCTGAAAAAGAAGAAGAAGAAGATCGTGATGAACAACCTTCTTCCGAAGAAGAAGAAGAAGACGATGATGAAGAAGAGGAAAAAACTCAACCTCAATCCAAAAACCCTAAATCCGCTGATTCTTCTGAATCCGTCACCGATTCTGATTCTGGATCCGAATCTGAATCAGAATCACGTGATGCTTCCAATTACCAAATCCAACCCAAACCCCTTGCTTTGAAGCCAGTTGATGAAACTCCTGTTAAGGTGAATTCGAAATCGTCGAAGCGCCCTGTTGAGAGTAACGGTAGCGGCGATGCGAGTCGTGCTAAGAAGAAAAAAGTTACAGATGCTGCTGCTGCAGCTGTTGCTGCTTCTTCAGAGAATAGCGATGATGAAGATGATGATGATGATGATGGTGATGGTGATGGAAAAGCTGCTGAAGTGAAGAAATCATCTGGTGCTGTTTCTGATTCTAAGAGTATTCCATTTCAGAGATTGTTTAGTGAGGAAGATGAGATTGCTATACTCAATGGAATGATTGAATTCAAGAAAACAACTGGGAATGATCCTTTTAGATTTATTAATTTTTTTCACCGTTTTGTGAGTAAATCGCTTCATATTGATGCGTCGAGCAACCAGTTGAAGGATAAGATTCAGAGGCTGAAGAGGAAGTTCAATGCCAATGCTAAAAAGAAGAGTTTTTCTAAACGCCACGACGAAGAAGCATTTGAATTGTCTAAGAAGATTTGGGGCAATGCTGGTGGTTCCAATGAAATAGTGGAGAAAGCCAAGTCTAATGGAAAAGCTCTGAAAAGTGCAATGAAGGAAGGTAGCAAAGGGAATGATGTTCCTTTGAAATCAAAACCTGAACCAAAACAGGAGGTGAAATCATTAATGGATTCGAAGGATTCGAAGGAGGAAGCTGTGAATATGGAAACTGTTGAGAAGACTGATATTCCTTTGAGTATAGCGCAAGGTTTTGGTTCGTATGGGCTGAATGAGAATATGACGAAGAAGGCTTTGGATTTAATGGGTGCATCAGACAGGGCAAAATTGGAGAAACAATGGAAGGAATTCGAAGCTGCAGAGTTTGAGGCGTCTGTGAAACGTCTAGAACTAGTTGCGAAGCATGCTAGGTTGATATGGGAGGCATACGAGGCATCAAATCATTAG 1245 0.4185 MAQKQKRPSPHDVPPSVSSDDEPIPSSQPESEKEEEEDRDEQPSSEEEEEDDDEEEEKTQPQSKNPKSADSSESVTDSDSGSESESESRDASNYQIQPKPLALKPVDETPVKVNSKSSKRPVESNGSGDASRAKKKKVTDAAAAAVAASSENSDDEDDDDDDGDGDGKAAEVKKSSGAVSDSKSIPFQRLFSEEDEIAILNGMIEFKKTTGNDPFRFINFFHRFVSKSLHIDASSNQLKDKIQRLKRKFNANAKKKSFSKRHDEEAFELSKKIWGNAGGSNEIVEKAKSNGKALKSAMKEGSKGNDVPLKSKPEPKQEVKSLMDSKDSKEEAVNMETVEKTDIPLSIAQGFGSYGLNENMTKKALDLMGASDRAKLEKQWKEFEAAEFEASVKRLELVAKHARLIWEAYEASNH* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g1009 414 MobiDBLite consensus disorder prediction 111 125 - -
Lan19g1009 414 MobiDBLite consensus disorder prediction 33 57 - -
Lan19g1009 414 MobiDBLite consensus disorder prediction 64 95 - -
Lan19g1009 414 MobiDBLite consensus disorder prediction 151 165 - -
Lan19g1009 414 Pfam Protein of unknown function, DUF573 187 275 IPR007592 GO:0006355
Lan19g1009 414 Coils Coil 235 255 - -
Lan19g1009 414 PANTHER BNAANNG10740D PROTEIN-RELATED 12 411 IPR007592 GO:0006355
Lan19g1009 414 MobiDBLite consensus disorder prediction 1 182 - -
Lan19g1009 414 MobiDBLite consensus disorder prediction 305 330 - -
Lan19g1009 414 PANTHER STOREKEEPER PROTEIN 12 411 - -
Lan19g1009 414 MobiDBLite consensus disorder prediction 298 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g1009 Lan-Chr19 17395098 17397539 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g1009 99 411 GeBP Transcription Factor Family AT4G25210 32.840 1.05e-29 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Lan19g1009 DUF573 6.2e-27 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g1009 - - lang:109334524 631.713