Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0999 ATGGCTGAGGAATTTCTTCAAGCTGGAATTTATGGTGAAAACTGGTGGAATATGAATTCATCAAGAAGTGTGTTCCCTCTTATGAACTCATCATCAACATGTTCAGTGGCTGCTAATGATGCAGGGAACTATAACATATTGCAAACTGATTTCTTGGATTTCAAGCCAACAAGGTCATGTGCTGAGAACACAAATAATAATTATTATTTTGTTTCTGATGCTTCTCTTGGTTTTCTTGAAGATCATAAGCCACATCAGAGTGAATCAGCAGCTAGTGAAAGTGATAGCATCTTCATTGATATGGGTTTTGGCTTGTCCTCATCAACTTCATTGAATTGGAACCAGTCTCTATTTGGTCATTGTAGTGGAAAGCTAGAGAGCAATTTTGATTATGTGATTCAAGAAGAAACAGGTTTAGATTCTTCAAATGATTTACAAAGCCAAAAGGATTGGAGTCCAAATAAATCACAATCACCAGTTAATACTTTCAAGCCAATGAATCAAGAACTTTGCTTAGATCAACAAGGTCTGAATTCTATAACTAGCACTGGATTATCATGTGGTTTCCCAGTAGGGTCAACAACCTCCTATGGTTACCCTTCAAATTTGATTCAAAGCTTATATGACCCTTCTACTATGTCCTACTCATCTTCACCAAACTATGGAACATCTTCCTCCAATACACTCTCACCAACAACATGGTCTAAAGTACCTAATTCTCTTATGCCAAAGCATCATCTTAGTGGTGGATTGCACTTTACCAATAATACTCCTTTCTGTAATGCTTCAGCTGAGGCACTAAATGACATAACAGAAGGTGTTTTTGCTTCATCACAAACACAGTATCAAACACCAACTTTTGAAGAGAAACCCATTTCCCCAAGTACTCTATTAAACAAGCTAAAGAAAGATGAATCTCGAGACACAGCATCAGTGGTGAAGAAAAGTGGTTGTGAACCAGCATTCAAGAGACAAAGAATTGAAACTCCATCACCATTGCCTACTTTTAAGGTTCGGAAAGAGAAGCTAGGGGACCGGATCACTGCACTTCAACAATTGGTTTCACCTTTCGGAAAGACAGACACAGCATCGGTTCTTCACGAAGCCATTGACTACATCAAGTTCCTTCATGATCAAGTCACTGTTTTGAACACTTCATATCTTAAAAACGGTGCTCACATTCAGCACCAACAGAGATGTGATAATCTGAGTGATTCAGAAGGCCCAAAACAAGATTTAAGAAGCAGAGGGCTATGTTTGGTTCCAATTTCAAGCACATTCCAAGTAGTTAATGAGACAAGTGTTGATTTCTGGACTCCAACATTTGGAGGCGCATTCATCAGCAGCTAG 1350 0.3867 MAEEFLQAGIYGENWWNMNSSRSVFPLMNSSSTCSVAANDAGNYNILQTDFLDFKPTRSCAENTNNNYYFVSDASLGFLEDHKPHQSESAASESDSIFIDMGFGLSSSTSLNWNQSLFGHCSGKLESNFDYVIQEETGLDSSNDLQSQKDWSPNKSQSPVNTFKPMNQELCLDQQGLNSITSTGLSCGFPVGSTTSYGYPSNLIQSLYDPSTMSYSSSPNYGTSSSNTLSPTTWSKVPNSLMPKHHLSGGLHFTNNTPFCNASAEALNDITEGVFASSQTQYQTPTFEEKPISPSTLLNKLKKDESRDTASVVKKSGCEPAFKRQRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIDYIKFLHDQVTVLNTSYLKNGAHIQHQQRCDNLSDSEGPKQDLRSRGLCLVPISSTFQVVNETSVDFWTPTFGGAFISS* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0999 449 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 16 437 - -
Lan19g0999 449 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 327 376 IPR011598 GO:0046983
Lan19g0999 449 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 337 394 IPR036638 GO:0046983
Lan19g0999 449 CDD bHLH_AtbHLH_like 333 383 IPR045239 -
Lan19g0999 449 Gene3D - 337 402 IPR036638 GO:0046983
Lan19g0999 449 PANTHER TRANSCRIPTION FACTOR BHLH123 16 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0999 Lan-Chr19 17310488 17321263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0999 1 444 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 37.797 7.10e-58 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0999 - - lang:109333637 909.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0999 19 17310488 17321263 Lan16g0102 16 795491 804788 LSH