Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0995 ATGGGTAGCAAGGTCAATTTGTTCTTCTCTCCTCTTCACCAATCAAAGACTTTGAAATTCTCTTCCACACCACACCACACCACATCACATGAAGAAACAAGAAACCAAACACAAACACAAACACTTGATCTATCTTTCTATATTCTCACAATCTCAAACAACTCTCTCACGTTTGATCCTTCAAACATGAGAGGTTTAACTTTCTTCTTTTTTTGGTTCTTCACATCACACACTTTTCTCACCACAACCTTTGCACATACCTTAACAGCAACACAAACTCTCACAACCAACCAAACCCTCTTATCACAAAATGAAATTTTTGTACTAGGATTCTTTTCTGGAACACACTCCAACTTGTACTTAGCCATATGGTATAAAAACACACCTGAAAAAACCATTGTATGGGTTGCAAATAGAGACAACCCTCTTCACAATTCCACAGGATCTCTCAAATTTGGAGACAGTGGAAACATAGTTCTTGTCAATGATTCTGGTAACACTATATGGTCCTCAAATCAAACCATAGCTAGAAATCCAGTGCTTCAACTTTTGGATTCTGGTAATCTAGTTATAAGAGAAGCAAATAGTGACAACACAAATTTTTTATGGCAAAGTTTTGATTTTCCAACAGATACACTATTACCAGGAATGTACCTAGGTTGGAACATGGACACAGGCATAGAGAAACACATAACATCATGGAAGATCAATGGACAAGACCCTTCAACTGGAGATTATTCTTTCAAGATGAATTATCATGGACTACCAGAAATTTTTCTATGGAACAATAATGAAATAATATATAGAAGTGGTCCTTGGAATGGTGATAGATTCAGTGGTGTACCAGAAATGCAACCTGATACAGATTCTATTAATTTTACCTTCACAGCAAATGAACATGAAGTATATTACTCATTCTCAATCATGAACCAATCCTTGTTTTCAAGGCTTTCTGTGACCTCAGATGGTGAACTACAAAGACTTACATGGATACAAAGCAATAAAGTTTGGACTAAGTTTTGGTATGCACCAAAAGACCAATGTGATGGTTATAGAGAGTGTGGTCCAAATGGTATATGTGATTCTAATGCTTCACCTGTTTGTAAATGTTTGAGAGGGTTTAGGCCTAAGGATCAACAAGCTTGGAATTTGAGAGATGGGTCTGGTGGGTGTGTGAGGAATAATGATTTGGATTGTAAGAGTGATAAGTTTTTGCATATGATGAATGTGAAGTTGCCAGAGACAAGAAATGTGTTTGTAAATAGGAGCATGACAATTGTGGAATGTGAAGATTTGTGTCATAGGAATTGTTCTTGTAGTGGTTATGCTAATGTTGAGATAACAAATGGAGGAAGTGGTTGTGTGATGTGGAATAGTGAGCTCATTGATATGAGACAGTATGATGAAGGTGGACAAGATCTCTATGTCAGATTAGCAGCTTCTGATCTTGGTGCATCTCATGAAACAAATGATAGAGCTAAGATTGTAGGAATCACAATTAGTTCCTCTGTTGTACTTTTTGGATTATTGGGTATCTATTTCATATGGAGAAAAAGAAAATTGCAAAGTAAAATGAATGAGAATCAAGAACAAAGAGGTTCTTTACAGAGAAACCAGCATCCACTAATGAATGAGGTTGTGTTTTCAAGTAATAGATACTCAGGAGAAAGGAATATGGATGAACTAGAATTGCCAATGTTTGATTTCAATACCATAACAATGGCTACAAACAATTTCTCAGAAACAAATAAACTAGGCCAAGGAGGGTTTGGTAGTGTTTACAAGGGCAGGTTGATGGAAGGACAAGAAATTGCTGTGAAAAGGTTGTCAAAAACCTCAGGGCAAGGAGTTGATGAATTTAAGAATGAGGTTAAGTTAATTATCAAGCTCCAACATCGAAATCTTGTTCGGCTTTCCGGTTGTTGCATTGAGAAGGATGAGAGGCTTTTGGTGTATGAGTATATGGAAAATAGAAGCCTTGATTCCATTTTGTTTGACAAAGCCAAAACTTCCTTGTTGGATTGGAAAATTCGCTTCAACATTATTTGTGGAATAGCAAGAGGGCTTCTTTATCTGCACCATGATTCCAGGTTTAGAATTATCCATCGGGATCTGAAGGCAAGCAACATTTTACTCGACAAAGATATGAACCCAAAAATATCAGACTTCGGAATGGCTCGAATGTTTCACACAGATCAGACAGAAGCAAATACATTGAGAGTTGTTGGAACATATGGCTATATGTCTCCGGAGTATGCTATGGACGGAAACTTCTCAGTGAAGTCTGATGTTTTCAGCTTCGGAGTCTTAGTTCTGGAGATCATAAGTGGAAAGAAGAATAAAGGATTCTATTATGCAAATGATGAATTGAATCTTTTAGGGAATGTATGGAGGAAGTGGAAAGAAGGCAATGCATTAGAACTTATTGATTCATCCATTGGCGACTCATATTCGCCATCTGAAGCTCTTAGATGCATACACATCGGCCTCTTATGCGTCCAGGAACGCGCCGAAGATAGGCCGAAAATGCCTTCAGTGATCTTGATGCTGAATAGTGAAACTGCATCAATGCCAGTACCTAGAAACCCTGGTTTCTCTGTAGGAAGAAATCCGACCGAGACTAATTCTTCTTCAAGTAAGCAAGATGAATCATGGAGTGTGAACCAAGTCACAGTCACAGTACTTGATGCTAGGTAG 2697 0.3775 MGSKVNLFFSPLHQSKTLKFSSTPHHTTSHEETRNQTQTQTLDLSFYILTISNNSLTFDPSNMRGLTFFFFWFFTSHTFLTTTFAHTLTATQTLTTNQTLLSQNEIFVLGFFSGTHSNLYLAIWYKNTPEKTIVWVANRDNPLHNSTGSLKFGDSGNIVLVNDSGNTIWSSNQTIARNPVLQLLDSGNLVIREANSDNTNFLWQSFDFPTDTLLPGMYLGWNMDTGIEKHITSWKINGQDPSTGDYSFKMNYHGLPEIFLWNNNEIIYRSGPWNGDRFSGVPEMQPDTDSINFTFTANEHEVYYSFSIMNQSLFSRLSVTSDGELQRLTWIQSNKVWTKFWYAPKDQCDGYRECGPNGICDSNASPVCKCLRGFRPKDQQAWNLRDGSGGCVRNNDLDCKSDKFLHMMNVKLPETRNVFVNRSMTIVECEDLCHRNCSCSGYANVEITNGGSGCVMWNSELIDMRQYDEGGQDLYVRLAASDLGASHETNDRAKIVGITISSSVVLFGLLGIYFIWRKRKLQSKMNENQEQRGSLQRNQHPLMNEVVFSSNRYSGERNMDELELPMFDFNTITMATNNFSETNKLGQGGFGSVYKGRLMEGQEIAVKRLSKTSGQGVDEFKNEVKLIIKLQHRNLVRLSGCCIEKDERLLVYEYMENRSLDSILFDKAKTSLLDWKIRFNIICGIARGLLYLHHDSRFRIIHRDLKASNILLDKDMNPKISDFGMARMFHTDQTEANTLRVVGTYGYMSPEYAMDGNFSVKSDVFSFGVLVLEIISGKKNKGFYYANDELNLLGNVWRKWKEGNALELIDSSIGDSYSPSEALRCIHIGLLCVQERAEDRPKMPSVILMLNSETASMPVPRNPGFSVGRNPTETNSSSSKQDESWSVNQVTVTVLDAR* 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0995 898 SMART blect_4 91 209 IPR001480 -
Lan19g0995 898 Pfam D-mannose binding lectin 132 235 IPR001480 -
Lan19g0995 898 Pfam Protein tyrosine and serine/threonine kinase 582 847 IPR001245 GO:0004672|GO:0006468
Lan19g0995 898 MobiDBLite consensus disorder prediction 859 887 - -
Lan19g0995 898 SMART serkin_6 579 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0995 898 Coils Coil 518 538 - -
Lan19g0995 898 ProSiteProfiles PAN/Apple domain profile. 399 479 IPR003609 -
Lan19g0995 898 Pfam PAN-like domain 399 464 IPR003609 -
Lan19g0995 898 SUPERFAMILY Protein kinase-like (PK-like) 561 850 IPR011009 -
Lan19g0995 898 ProSitePatterns Protein kinases ATP-binding region signature. 585 607 IPR017441 GO:0005524
Lan19g0995 898 Gene3D Phosphorylase Kinase; domain 1 553 654 - -
Lan19g0995 898 CDD B_lectin 102 209 IPR001480 -
Lan19g0995 898 PANTHER - 70 897 - -
Lan19g0995 898 MobiDBLite consensus disorder prediction 867 887 - -
Lan19g0995 898 Gene3D - 80 206 IPR036426 -
Lan19g0995 898 SUPERFAMILY alpha-D-mannose-specific plant lectins 132 275 IPR036426 -
Lan19g0995 898 ProSitePatterns Serine/Threonine protein kinases active-site signature. 700 712 IPR008271 GO:0004672|GO:0006468
Lan19g0995 898 Gene3D Transferase(Phosphotransferase) domain 1 655 859 - -
Lan19g0995 898 Pfam Domain of unknown function (DUF3403) 852 898 IPR021820 GO:0004674
Lan19g0995 898 SMART ntp_6 399 478 IPR003609 -
Lan19g0995 898 Pfam Receptor serine/threonine kinase 536 569 IPR022126 GO:0004674
Lan19g0995 898 Pfam S-locus glycoprotein domain 268 377 IPR000858 GO:0048544
Lan19g0995 898 ProSiteProfiles Protein kinase domain profile. 579 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0995 898 PIRSF SRK 59 898 IPR024171 GO:0004674
Lan19g0995 898 CDD STKc_IRAK 585 851 - -
Lan19g0995 898 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 70 897 - -
Lan19g0995 898 CDD PAN_AP_plant 396 479 - -
Lan19g0995 898 ProSiteProfiles Bulb-type lectin domain profile. 85 204 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0995 Lan-Chr19 17283987 17290126 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0995 567 898 Receptor kinase-like Gene Family AT4G11530 59.644 7.75e-136 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan19g0995 PK_Tyr_Ser-Thr 2.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0995 - - gmx:100797331 1225.31