Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0994 ATGAGAAGTTTTACTAACACCATCCCTTTCTTCATCTTTTGGTTTTTCACATCACAAACTTTTTTCACCAAAACCTCTGCAGATACTTTAACAGGAACTCAAACTCTCAGAACAAACCAGACCCTCTTATCATCAAACCAAACTTATGTACTAGGATTCTTCACAGGAAGCAATTCCAACTTGTATTTAGGCATATGGTATAGGAACACTACTCCTGAAAGAACAATAGTTTGGGTAGCAAATAGAGACAACCCTCTTAACAACTCTGGCGGATTTCTCAAATTTGGAGACAGCGGAAACATAGTTCTTGTCAATTCATTTGAGAACACCATATGGTCTTCAAATCAAACCTCGGCTAAGAATCCAGTTCTTCGACTTTTGGATTCGGGGAATCTAGTTATCGTAGAAGCAAATAGTGACCCTACTAAGTATCTATGGCAAGGTTTTGATCACCCTTCAGATACACTATTACCAGGAATGAAAGTTGGACAGAACTTGGACACAGGCATAGAGATGCACTTAACATCATGGAAAGTCACAGGGCAAGACCCTTCGACCGGAGATTATTTCACAAAGCTAGATTATCATGGACTACCAGAGATGTTTATATTGAACAACAACCAGACAGTATTTAGAACTGGTCCATGGAATGGTGAAGGATATAGTGGTATGCCTGAGATGCATGCTGATACAGATTCTATTGAATTTTCTTTTATTGCTGATGCAGATGAGGTATATTACTCATACACCATTGGGAACAATTCTTTGATCTCAAGGCTTATTTTGACATCCGATGGTCTACTTCAACGCTTTACGATGCTAGAAGGAACCCAAGCTTGGAGTATGTTTTGGTATGTACCTAGAGATCAATGTGATGATTATAAAGAGTGTGGTCCAAATGGTATATGCGACAATAACGCTTCTCCGGTTTGTAAGTGTATGAGAGGCTTCAGTCCTAAGAATCAGCAAGCTTGGGATTTGAGAGATGGGTCTGATGGGTGTGTGAGGAACACAGATTTGGACTGTGGGAATGATAAGTTTTGGAAAGTTCAGTATGTGAAGTTGCCTCAGACAGGAACTGCTTTTGTGAATAGGAGCATGACACTTTTGGAATGTGAAGCTTTATGTCAAAGGAATTGTTCTTGCACTGCTTATGCTAATGCTGATATAAGGAATGGAGGGAGTGGTTGTGTAATGTGGATTAGTGAGCTCATAGACATGAGGCAGTATTCTGAAGGTATCGGTGGCCAAGATCTCTATGTCAGATTAGCCGCTTCTGATGTAGGTGGCTCTGGCAAGACAAGTAATATTGCTGAGATTGTAGGCATCACAGTTAGTGCAATTGTTGTGCTTTTGGGATTATTGGGTATCTATTTCATAAGGAGGAAGAGGAAATTGCAAAGTATATTGAATGGAAATACAGAACAAATAGGTTCTTTCCATAGAAATCAAGATCCGGTTACGAATGAGGCGGTATTTTCAAGCAATATGGATGACTTAGAATTGCCAATGTTTGATTTTGATACCTTAACAATGGCCACAAATAACTTCTCTGAAGCAAATAAAATAGGAGAAGGAGGCTTTGGTAGTGTTTACAAGGGCATGTTAATAACAGGCCAAGAAATTGCTGTGAAGAGGTTATCAAAAACTTCTGGACAAGGAGTTGAAGAATTCAAGAATGAGATCAAGTTGATTATCAAGCTCCAGCATCGAAATCTTGTTCGGATGTTAGGTTGTTGCATCGAAAAGGATGAGAAGTTGTTGGTGTATGAGTACATGGAAAATAGAAGCCTTGATTCTTTCTTGTTTAACAAAGACAAAAGACACTTGTTGGATTGGAGAAGGCGATTCGACATTATATGTGGAATAGCTAAAGGACTTCTTTATCTGCATTACGATTCGAGATTCAGAATCATCCATAGAGATCTCAAAGCAAGCAACATTCTACTCGACAAAGAAATGAACCCAAAGATTTCAGACTTCGGGATGGCTAGAATGTTTCACACAGATCAAACAGAAGCAAATACATTAAGAGTTGTTGGAACATATGGCTATATGGCTCCTGAGTATGCCATGGACGGGAACTTCTCAGCGAAATCGGATGTTTTTAGCTTTGGTGTTCTAGTGCTGGAGATCATAAGTGGAAAGAAGAATAGAGGATTTTATTACAAAAATGATGACATGAATCTTCTAGGGAATGTATGGAAGCAATGGAGAGAAGGAACTACATTGGAACTAATAGATTCATCTATTGGAGACTCATATTCAACATGTGAAGGTCTTAGATGCATACACATAGGACTTTTATGTGTCCAAGAACGTGCAGAAGATAGACCAACAATGTCTTCAGTGGTGATGATGCTGAATAGTGAAACAACATCAATGGCACAACCAAAAACTCCAGGATTTTCAATAGGGAAAAATCATGTGGACACTGATTCTTCTTCAACCAACAAAGATCAAACATGGAGTGTTAACCAAGTCACAGTGACACTGCTAGATGCTAGGTAG 2511 0.3903 MRSFTNTIPFFIFWFFTSQTFFTKTSADTLTGTQTLRTNQTLLSSNQTYVLGFFTGSNSNLYLGIWYRNTTPERTIVWVANRDNPLNNSGGFLKFGDSGNIVLVNSFENTIWSSNQTSAKNPVLRLLDSGNLVIVEANSDPTKYLWQGFDHPSDTLLPGMKVGQNLDTGIEMHLTSWKVTGQDPSTGDYFTKLDYHGLPEMFILNNNQTVFRTGPWNGEGYSGMPEMHADTDSIEFSFIADADEVYYSYTIGNNSLISRLILTSDGLLQRFTMLEGTQAWSMFWYVPRDQCDDYKECGPNGICDNNASPVCKCMRGFSPKNQQAWDLRDGSDGCVRNTDLDCGNDKFWKVQYVKLPQTGTAFVNRSMTLLECEALCQRNCSCTAYANADIRNGGSGCVMWISELIDMRQYSEGIGGQDLYVRLAASDVGGSGKTSNIAEIVGITVSAIVVLLGLLGIYFIRRKRKLQSILNGNTEQIGSFHRNQDPVTNEAVFSSNMDDLELPMFDFDTLTMATNNFSEANKIGEGGFGSVYKGMLITGQEIAVKRLSKTSGQGVEEFKNEIKLIIKLQHRNLVRMLGCCIEKDEKLLVYEYMENRSLDSFLFNKDKRHLLDWRRRFDIICGIAKGLLYLHYDSRFRIIHRDLKASNILLDKEMNPKISDFGMARMFHTDQTEANTLRVVGTYGYMAPEYAMDGNFSAKSDVFSFGVLVLEIISGKKNRGFYYKNDDMNLLGNVWKQWREGTTLELIDSSIGDSYSTCEGLRCIHIGLLCVQERAEDRPTMSSVVMMLNSETTSMAQPKTPGFSIGKNHVDTDSSSTNKDQTWSVNQVTVTLLDAR* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0994 836 SUPERFAMILY Protein kinase-like (PK-like) 499 788 IPR011009 -
Lan19g0994 836 Pfam Domain of unknown function (DUF3403) 790 836 IPR021820 GO:0004674
Lan19g0994 836 Gene3D Transferase(Phosphotransferase) domain 1 593 803 - -
Lan19g0994 836 SMART serkin_6 517 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0994 836 Gene3D Phosphorylase Kinase; domain 1 479 592 - -
Lan19g0994 836 MobiDBLite consensus disorder prediction 795 820 - -
Lan19g0994 836 Pfam Protein tyrosine and serine/threonine kinase 520 787 IPR001245 GO:0004672|GO:0006468
Lan19g0994 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Lan19g0994 836 ProSiteProfiles EGF-like domain profile. 287 323 IPR000742 -
Lan19g0994 836 ProSitePatterns Protein kinases ATP-binding region signature. 523 545 IPR017441 GO:0005524
Lan19g0994 836 ProSiteProfiles Bulb-type lectin domain profile. 27 147 IPR001480 -
Lan19g0994 836 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 178 IPR036426 -
Lan19g0994 836 CDD PAN_AP_plant 338 424 - -
Lan19g0994 836 Pfam S-locus glycoprotein domain 211 321 IPR000858 GO:0048544
Lan19g0994 836 Gene3D - 21 149 IPR036426 -
Lan19g0994 836 Pfam D-mannose binding lectin 75 178 IPR001480 -
Lan19g0994 836 ProSiteProfiles PAN/Apple domain profile. 342 424 IPR003609 -
Lan19g0994 836 CDD B_lectin 33 152 IPR001480 -
Lan19g0994 836 CDD STKc_IRAK 523 789 - -
Lan19g0994 836 SMART ntp_6 342 423 IPR003609 -
Lan19g0994 836 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 835 - -
Lan19g0994 836 PIRSF SRK 1 836 IPR024171 GO:0004674
Lan19g0994 836 Pfam PAN-like domain 342 407 IPR003609 -
Lan19g0994 836 ProSiteProfiles Protein kinase domain profile. 517 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0994 836 PANTHER - 18 835 - -
Lan19g0994 836 SMART blect_4 33 152 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0994 Lan-Chr19 17279581 17283024 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0994 505 836 Receptor kinase-like Gene Family AT4G11530 58.160 1.01e-134 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan19g0994 PK_Tyr_Ser-Thr 3.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0994 - - gmx:100797331 1165.21