Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0993 ATGATCATCACACACCAATATATTATTTTTGTTCTCTGTTTCCTCTGTTTCCTCTGTTTCAATACTCTGTTTTCACGTGCAACCACTTCCATGATCACACAAGGTGAATTCTTAAGAGATGGTGAAACTCTTATATCAGAAAAGCTCAACTTTCAAATGGGTTTCTTCACTCCAAATAACAACAACAATTCATCTTATTCACGTTACGTTGGAATTTGGTACTACAACATTCCTAAACCAGAATTTGTTTGGGTTGCAAATAGAGACAAACCCATTAATGGTAGAGGAGGTTATATAACTATAACAAGTGATGGTAACTTAGTTATATTTGATGACAAAAATACACTATTATGGTCTACCAATGTTTCATCTTCGAAGAAAAACTCAGAAGCTGTGCTTCATGATGATGGAAATCTTGTACTTTCAAGTAAAGGTGGTAATAATGGTAAGAAACAAGTTTTATGGAAAAGTTTTGATAACCCAACTGATACATATCTACCTGGTATGAAAGTTCCAGTGAGTGGTGTAGAAGTGAAGAAGAATATGAAGAACTATGCTTTTACATCATGGAAATCGAATACTGATCCTTCACTAGGGAACTATACAATGGGTATTGATCCTGAGAAGTTACCTCAGATAGTGGTTTGGGAAGGAGGGAATAGAAGGTGGAGAAGTGGTTATTGGGATGGTAGAATTTTCAGTGGTGTGAATATGACAGGAAGTTATTTATATGGTTTTACACTTAATGTGGATAGTGAAGGTGGTAAATATTTTGTGTATAGTCCATTGAATATTGGTGATAAGGTGAGGTTTCAAATAGGGTTTGATGGATATGAAAGAGAGTTCAAGTGGAGTGAAGATGAGAAGAAATGGAATCAGATACAAAAGGGTCCTATTAATGAGTGTGAGGTTTATAACAAGTGTGGTAGTTTTGCAGCATGTTATATATCAACTTCTTCACCTATGTGTAGTTGCATAAAGGGGTTTGAGCCAAAGCATAGGGATGAGTGGAGTAATTTGAATTGGTCTAGTGGATGTAAGAGGATAACTCCACTGAAGGATGAGATAAGTAATAGTTCTGGAAGTGAGGTGAATGTTAGAGAAGATGGCTTTTTGGAACTTAGGGGTATGAAGTTGCCGGATTTTGCGCGTTTGGTCGATGTCAATAATCATAATGGCACTGAAGGTTGTAAGAGAAGTTGCTTGAGGAATAGTTCTTGTATTGCATATGCAAATGTTATTGGAATTGGGTGCATGGTTTGGGATGAAGAGTTAGTTGATGTTCAACACTACGAAACTGGAGGAAATACACTGCATATTCGCCTCGCTAATTCTGATTTAGATACAGGCGATGGTGGCAAAAAGAACAAGATTTTGATAATATCATCTGTTCTGCTAGGATCAATCTGCTTAGGAATATTTGTGTTGCTTGTATGGAGGTTCAAAAGAAAACTCAAAGTTTTGCCTACAGTTTCCTCAGCTTCATGTTGCAAGGATAGTGATGTTGATATACCATTCTATGATGTGAGAATGAGTAGAGACTTGTCAGCTGAACTTTCGGGATCAGCCGACCTTGGTTTGGTAGGGAATGAACTAAGTCGACCAGAACTTCCACTTTTCTATTTTAGTTACATTTCAAAAGCCACAAACAATTTCTCAGAAGAAAATAAGCTTGGGCAAGGAGGCTTTGGTCCTGTCTACAAGGGAAAGCTCCAAAGTGGAGAACAAATAGCTGTCAAGAGGCTATCAAAACGATCCGGCCAAGGTTTGGAGGAGTTCAAGAATGAAATGGTGCTCATTGCCAAACTACAACATCGAAATTTAGTTCGACTAATGGGTTGTTCTATTCAAGGGGAAGAAAAGTTGCTTGTGTATGAGTATATGCCAAACAAAAGCTTAGACTGCTTTTTATTCGATCCTGTGAAGCAAGCACAACTAGATTGGACAAGACGCTTAGAAATCATCGAAGGCATTGCAAGAGGGCTACTTTATCTGCATCGCGATTCAAGGCTCAGAATAATTCATCGAGATCTAAAAGCAAGCAACATTTTGTTGGACCAAAACATGAACCCAAAAATCTCAGACTTTGGCTTGGCTAGGATATTTGGTGGAAACCAGAATGAAGCTAATACAACCAGAGTGGTCGGGACATATGGCTATATGTCTCCGGAATATGCAATGGAAGGTCTATTTTCAGTCAAATCTGACGTATATAGTTTTGGAGTATTACTGCTAGAGATCATAAGTGGCCGCAGGAATGCTAGCTTCCGCAACTCAAATGACTCAAGTCTCATAGAATATGCTTGGCATCTTTGGAGTGAACAAAGAGCAATGGAGCTTGTCGATCCTTGTATTCGCGATTCTAGTCCTAAAATCCAAGCTTTGAGATGCATACACATAGGAATGTTATGTGTGCAAGATTCAGCAGCTCATAGACCAAACATGTCCACTGTAGTGTTGATGCTGGAAAGTGAAACAACAACTCTTACAATGCCTAAACAACCTTTGATTACTTCCATGAGGGTATCTCAGGAAAGAGAATTTCATATGGATTCCCTTGATGTTTCAAATGATTTGACAGTCACAATGGTTGTAGGGAGATAG 2604 0.3833 MIITHQYIIFVLCFLCFLCFNTLFSRATTSMITQGEFLRDGETLISEKLNFQMGFFTPNNNNNSSYSRYVGIWYYNIPKPEFVWVANRDKPINGRGGYITITSDGNLVIFDDKNTLLWSTNVSSSKKNSEAVLHDDGNLVLSSKGGNNGKKQVLWKSFDNPTDTYLPGMKVPVSGVEVKKNMKNYAFTSWKSNTDPSLGNYTMGIDPEKLPQIVVWEGGNRRWRSGYWDGRIFSGVNMTGSYLYGFTLNVDSEGGKYFVYSPLNIGDKVRFQIGFDGYEREFKWSEDEKKWNQIQKGPINECEVYNKCGSFAACYISTSSPMCSCIKGFEPKHRDEWSNLNWSSGCKRITPLKDEISNSSGSEVNVREDGFLELRGMKLPDFARLVDVNNHNGTEGCKRSCLRNSSCIAYANVIGIGCMVWDEELVDVQHYETGGNTLHIRLANSDLDTGDGGKKNKILIISSVLLGSICLGIFVLLVWRFKRKLKVLPTVSSASCCKDSDVDIPFYDVRMSRDLSAELSGSADLGLVGNELSRPELPLFYFSYISKATNNFSEENKLGQGGFGPVYKGKLQSGEQIAVKRLSKRSGQGLEEFKNEMVLIAKLQHRNLVRLMGCSIQGEEKLLVYEYMPNKSLDCFLFDPVKQAQLDWTRRLEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDQNMNPKISDFGLARIFGGNQNEANTTRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIISGRRNASFRNSNDSSLIEYAWHLWSEQRAMELVDPCIRDSSPKIQALRCIHIGMLCVQDSAAHRPNMSTVVLMLESETTTLTMPKQPLITSMRVSQEREFHMDSLDVSNDLTVTMVVGR* 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0993 867 Gene3D - 23 158 IPR036426 -
Lan19g0993 867 Pfam Protein tyrosine and serine/threonine kinase 555 820 IPR001245 GO:0004672|GO:0006468
Lan19g0993 867 SMART ntp_6 366 442 IPR003609 -
Lan19g0993 867 SUPERFAMILY Protein kinase-like (PK-like) 536 852 IPR011009 -
Lan19g0993 867 CDD B_lectin 36 161 IPR001480 -
Lan19g0993 867 CDD STKc_IRAK 558 823 - -
Lan19g0993 867 ProSiteProfiles PAN/Apple domain profile. 366 443 IPR003609 -
Lan19g0993 867 Gene3D Phosphorylase Kinase; domain 1 529 627 - -
Lan19g0993 867 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 4 867 - -
Lan19g0993 867 Pfam PAN-like domain 367 428 IPR003609 -
Lan19g0993 867 CDD PAN_AP_plant 365 443 - -
Lan19g0993 867 ProSiteProfiles Protein kinase domain profile. 552 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0993 867 ProSiteProfiles Bulb-type lectin domain profile. 29 154 IPR001480 -
Lan19g0993 867 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 196 IPR036426 -
Lan19g0993 867 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 4 867 - -
Lan19g0993 867 PIRSF SRK 1 867 IPR024171 GO:0004674
Lan19g0993 867 SMART serkin_6 552 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0993 867 Pfam S-locus glycoprotein domain 223 332 IPR000858 GO:0048544
Lan19g0993 867 ProSiteProfiles EGF-like domain profile. 298 335 IPR000742 -
Lan19g0993 867 SMART blect_4 35 161 IPR001480 -
Lan19g0993 867 ProSitePatterns Serine/Threonine protein kinases active-site signature. 673 685 IPR008271 GO:0004672|GO:0006468
Lan19g0993 867 Pfam D-mannose binding lectin 82 191 IPR001480 -
Lan19g0993 867 Gene3D Transferase(Phosphotransferase) domain 1 628 838 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0993 Lan-Chr19 17274042 17278100 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0993 529 835 Receptor kinase-like Gene Family AT4G23230 64.286 7.09e-134 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan19g0993 PK_Tyr_Ser-Thr 6.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0993 - - aprc:113869342 1239.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g0700 6 6178275 6182432 Lan19g0993 19 17274042 17278100 PCT