Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0991 ATGGAATTAACAAGACATGATTCTAAGTTGCTAAATCCTTTGTTCTTATTTTCAACCATTTTCTTTGGTTTGAGTTCAGCCAGAGACACCATTACACCATCTCAATTCATCACAGACTCAGAAACAGTAACCTCAAGTGACAATGTCTTCAAACTTGGGTTTTTCAGCCCTGCAAATTCGACGAACCGTTATGCAGGAATCTGGTATCTCTCTGACACCAACAACATTATATGGATAGCTAACAGAAACCAACCACTCAAAGACTCTTATGGTATTCTGAAAATCTCTGAAGATGGTAATCTTGTAGTACTTGGTGGGAAAAAAAGTGAGGTAGTTTGGTCTTCAAATGTGTCAAGTGCTGCAAACAGTTCAACTTTTCAAGCTCAACTTTTGCATTCTGGAAATCTAGTACTAATAGATAACACTACTGGAAAGACGGTATGGGAGAGTTTCAAACATCCTTGTGATGCAGCAGTGCCAACTATGAGAATTAGTGCTAATAGGATCACTGGTGAGAGAATAAGGTTTATATCAAGGAAAAGTGATTCTGATGTTTCTACCGGAGAATTCAGTGCTACTATCGAACGTCTTGATGCTCCCGAAGTGTTTTTTTGGATTAATGGAACTAGGCCTTATTGGAGGACTGGTCCATGGAATGGTAGAATCTTTATTGGGACACCAATGATGTCAACTGGTTATCTATATGGATGGAGTGTTGGATATGAAGGAAATGACACTGTTTATCTAACTTATAGTTTTGCTGAACCATCTAAATTTGGAATCCTTTCTTTGAATCCACAAGGTAATCTTAGACTAGTAAGATTTTATAACCAAATTGAAGTGTTGAATATGGTGTTGGAAAATTCTAAATGTGATGTTTATGGATTATGTGGAGCATTTGGAAGCTGTAATTTGAATAACTCACCAATTTGTAGTTGTTTGAGTGGATATGAACCAAGGAATTTGGAGGAGTGGAATAAGCAAAATTGGACTAGTGGTTGTTTGAGAAAGGAACCTTTGAAGTGTGAAAAGTTGACAAAAAATAGAAGTGAAGTAGGCCAAGAAGATCATTTTTTGAAACTTGGTATGATGAAAGTTCCAGACTTTGCAGAGAGGTTAGATGTTGAGGAAAGCCAATGTGGAACCCAATGCTTGAAGAATTGCTCATGTTTGGCATATGCATATGATGCTGGCATCGGCTGCATGTACTGGAGTGGAGACCTGATTGACTTACAAAGGTTCTCAAGTGCAGGAGTTGATCTCTTCATCCGTCTCGCCCATTCAGAACTCGGTAATGCAGAAAATCACACAGATAGACAAAGAAAAAAGAGATTAGTCATTGCACTTGCAGTGGCAACCGCAACAATTACATTAGCCATATGTGCATTTTTAGCCATTTGTGTATATCGCTCGCGAAAAAAGACTGCTGAACATTCAGAAATTCAGAGTCAGAGAATGATCGAAGTTCCGAAACCAGATAAGCTCGACGAGCTACCGCTGTACGATTTTGAGGTGCTTGAAACTGCTACAAACAACTTTCACTTGGCTAATACACTTGGAAAAGGCGGTTTTGGTCCAGTGTACAAGGGATTATTGCCAGATGGTCAGGAAATTGCAGTGAAAAGACTCTCCAGAGCATCTGGACAGGGGCTAGAAGAATTCATGAACGAGGTGGCCGTGATTTCCAGGCTTCAACATCGTAATCTTGTGAAAATTCTTGGCTGTTGTATTGAAGGAGATGAAAAGATGCTGATCTATGAGTTCATGCCAAATAAAAGTTTGGATGCATTTATTTTTGATCCACTCCAAAGGAAAGATTTAAACTGGACACGACGTTTTAGTATAATTGATGGAATTGCTCGTGGGCTGCATTATCTTCATAGAGATTCTAGATTAAGAATCATACATAGAGATTTGAAGGCAAGCAATATCTTGCTCGATGGAGAGATGAATCCAAAAATATCAGACTTTGGTTTGGCGAGAATATATAAAGGCGAAGATGAGATTAATACCAGAAGAGTTGTTGGTACATATGGCTATATGTCCCCCGAATATGCAATGGAAGGATTGTTTTCTGAGAAATCAGATATCTACAGCTTTGGAATTTTGTTACTCGAGATAGCTAGTGGAAAAAGAAACAGTAGCTTTCGAAACGACGAAGAGTCTCTCAGCCTCTTAGGATTTGCCTGGAAGTTATGGAATGAAAACAACATCAAGTCTTTGATAGATCCAGAGATATCTGCTTCAGGCTTTGAGAAACAAATTTTGAGGTGCATCCACATAGCATTTTTGTGTGTGCAAGAATTTGCTAAAGATAGACCATTTATGACTACTGTAGTGTTAATGCTTAATAGTGAGAATTCCAATCTTCCTCATCCTAAACAAGTTGCATTTGTTCAGAAGCAAAATCCATCAAGTTTGAAGTCCTCTCAGGCTAAGGAAAATCACTGTAACTCCAACAATTATGTAACACTTACTGATATCCATGGCAGATAA 2496 0.3842 MELTRHDSKLLNPLFLFSTIFFGLSSARDTITPSQFITDSETVTSSDNVFKLGFFSPANSTNRYAGIWYLSDTNNIIWIANRNQPLKDSYGILKISEDGNLVVLGGKKSEVVWSSNVSSAANSSTFQAQLLHSGNLVLIDNTTGKTVWESFKHPCDAAVPTMRISANRITGERIRFISRKSDSDVSTGEFSATIERLDAPEVFFWINGTRPYWRTGPWNGRIFIGTPMMSTGYLYGWSVGYEGNDTVYLTYSFAEPSKFGILSLNPQGNLRLVRFYNQIEVLNMVLENSKCDVYGLCGAFGSCNLNNSPICSCLSGYEPRNLEEWNKQNWTSGCLRKEPLKCEKLTKNRSEVGQEDHFLKLGMMKVPDFAERLDVEESQCGTQCLKNCSCLAYAYDAGIGCMYWSGDLIDLQRFSSAGVDLFIRLAHSELGNAENHTDRQRKKRLVIALAVATATITLAICAFLAICVYRSRKKTAEHSEIQSQRMIEVPKPDKLDELPLYDFEVLETATNNFHLANTLGKGGFGPVYKGLLPDGQEIAVKRLSRASGQGLEEFMNEVAVISRLQHRNLVKILGCCIEGDEKMLIYEFMPNKSLDAFIFDPLQRKDLNWTRRFSIIDGIARGLHYLHRDSRLRIIHRDLKASNILLDGEMNPKISDFGLARIYKGEDEINTRRVVGTYGYMSPEYAMEGLFSEKSDIYSFGILLLEIASGKRNSSFRNDEESLSLLGFAWKLWNENNIKSLIDPEISASGFEKQILRCIHIAFLCVQEFAKDRPFMTTVVLMLNSENSNLPHPKQVAFVQKQNPSSLKSSQAKENHCNSNNYVTLTDIHGR* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0991 831 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 19 829 - -
Lan19g0991 831 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Lan19g0991 831 Gene3D Phosphorylase Kinase; domain 1 470 588 - -
Lan19g0991 831 Pfam S-locus glycoprotein domain 213 320 IPR000858 GO:0048544
Lan19g0991 831 CDD PAN_AP_plant 353 426 - -
Lan19g0991 831 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 19 829 - -
Lan19g0991 831 SUPERFAMILY Protein kinase-like (PK-like) 496 809 IPR011009 -
Lan19g0991 831 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 220 IPR036426 -
Lan19g0991 831 Gene3D - 24 152 IPR036426 -
Lan19g0991 831 ProSiteProfiles PAN/Apple domain profile. 342 426 IPR003609 -
Lan19g0991 831 SMART blect_4 34 154 IPR001480 -
Lan19g0991 831 CDD B_lectin 34 154 IPR001480 -
Lan19g0991 831 Pfam Protein tyrosine and serine/threonine kinase 514 779 IPR001245 GO:0004672|GO:0006468
Lan19g0991 831 CDD STKc_IRAK 519 784 - -
Lan19g0991 831 PIRSF SRK 4 831 IPR024171 GO:0004674
Lan19g0991 831 Pfam PAN-like domain 354 411 IPR003609 -
Lan19g0991 831 ProSiteProfiles Protein kinase domain profile. 513 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0991 831 Pfam D-mannose binding lectin 76 180 IPR001480 -
Lan19g0991 831 Gene3D Transferase(Phosphotransferase) domain 1 589 803 - -
Lan19g0991 831 SMART serkin_6 513 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0991 831 ProSiteProfiles Bulb-type lectin domain profile. 28 151 IPR001480 -
Lan19g0991 831 SMART ntp_6 353 425 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0991 Lan-Chr19 17266611 17270456 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0991 472 798 Receptor kinase-like Gene Family AT4G11530 54.407 7.07e-120 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan19g0991 PK_Tyr_Ser-Thr 7.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0991 - - gmx:112998788 1229.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0715 4 9501964 9505962 Lan19g0991 19 17266611 17270456 LSH
Lan19g0991 19 17266611 17270456 Lan6g0700 6 6178275 6182432 PCT