Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0990 ATGGGATCCAATGGTAACATAAGTTTGTTATGTCTTTCAATTATATTTTGTTGCCTATGTTTAGATTCTGTGACTGCTTTAAACACTATCTCTTCATCTCAACTCATGAAGGATCCTGAAACCATAAGTTCCAATAATGACATGTTTACTTTAGGATTCTTCAGTCCTCAAAACAATACAAACCGTTATGTTGGTATATGGTACAAAACAAGAACCCTTTTGGTATGGATATGTAACAGAAACCAACCACTTCATGATTCTAAAGGGAGTCTTACAATATCTGAGGATGGAAATCTTGTTGTATTGAATGCAACAAAACATGTTATTTGGTCAACAAATGTGTCTAATATTTCACCAAACTCCAACACTAGTGCACAGCTTCTAGATTCTGGAAACCTTGTTCTGATAGAGAATGCTACAGGGAAAGCAATATGGAAGAGTTTTCTTCATCCTTCTAATGTTTTCATGCCGAATATGCAGCTTATAACAAACAAAAGAACTGGTGAGAGAGTTGAAGGTACATCATGGAAAAGCCCTTCTGACCCTTCATTTGGAAGCTTCAGTCTCAGCCTCGAACGGCCGAAAATTCCTGAGATTTTCATATGGGAGGGAACTAGGCCACACTGGCGTAGCGGTCCGTGGAATGGTAGAGTTTTTACAGGGATACCAACTATGCAATCTGTTTATAATCTCAATGGATTTAGTGTGCTAGTAGAAGGAGATTATAGTGTTCAACTCAGTTTTTCTCCAGCAAATAATGACATGTTGGTACTCTATATGATGGATTGGAAAGGGAAAATACAAGAAATGATTTGGAAAAATGATAAGACCCAATGGGAAGTTTTATTTACTGTTCAAGAAACTGATTGTGAAGTTTATGGAATATGTGGAGCATATGGAAGTTGCAGCTCAAAAGCTAAACCAATTTGCAACTGTTTGAGAGGGTTTGAACCAAGAATTGAAGAAGAGTGGAATAGGCAAAACTGGACAAGTGGATGTGTTAGAAAAAAATCTCTACAGTGTGAAAATAGCGATGTAAATAGCAAAAAAGATGGATTTCTGAAGCTGGAAAAGGTTAAAGTTCCGGATTTAGCAGATTGGTCATCGGCTAGATTGGAAGAGAAATGTAGAAGCCAGTGCTTGGAGAATTGCACTTGTACTGCATATTCATATGATGCTGGGATTGGTTGTTTGTCATGGAGTGGCAATCTAATTGACATACAACAATTTTCTTCTGGAGGCATTGATCTTTATATTAGAGTAGCTAATTCAGAACTTGACAAAGAGAGAGGTGCAACATTCATCATTGCAGCTATTACTGTGATAGTAGCATTGGTCATAATTGTCACATGTGCATATGTCATGTGGAAGTACTTCGGTAGAGAAAGGAAGAAAAGAAAGCTCTCACTCTTCAGCTGCTGTAAAGGTTCAGCTGAAAAAACAAATGACAGTATAATTGGAGAACTATCACAAGTTAAACTCCAGGAGCTATTGCTGTTTGATGCCGAAAAACTTGCGAATGCGACAGACGACTTTAACTTTTCCAATAAACTTGGAGAGGGTGGTTTTGGTCCAGTGTACAAGGGGAAACTAGAAAATGGTCAGGAAATAGCAGTTAAAAGACTTTCCCGTGCTTCAGGACAAGGGCTAGAAGAATTCATGAATGAGGTAGTGCTGATTTCTAAGCTGCAACATCGCAATCTAGTAAGACTTCTCGGCTGCTGTAGGGAAGGAGATGAAAATATGCTTATCTATGAGTACATGCCAAATAAAAGTTTAGACACATTCATTTTCGATCCACCTGAGCATAAATTCCTAGATTGGAAAAACCGGTTTAGCATCATAGAAGGAACAGCCCGAGGTTTGCTTTATCTCCACAGAGATTCCAGACTAAGGATCATACATAGAGATTTGAAAGCTAGTAATATATTGCTGGATGACGAGCTAAATCCAAAAATATCAGACTTTGGTTTGGCTAGAATATTTGGGGGGCATGGAGACCAGGATAAAACAAGAAGGGTCGTTGGAACATATGGCTACATGGCACCTGAATATGCAATGGGAGGGTTGTTTTCGGAGAAATCAGATGTCTTTAGTTTCGGAGTTTTGGTACTAGAGATTGTTAGTGGAAAAAGAAACTCTAGCTTCTATAACAATGATCAGTCTATAAGTCTTCTAGAATTTGCATGGAATCTATGGAATGAAGACAGAATTCTATCTTTAATAGATCAACATATATGTGACCCTGTCGATGAGAATGATATTTTGAGGTGTGTGCACATAGGACTATTGTGTGTGCAAGAAAGTGCAAGAAACCGGCCTAATATGGCAACTGTGATATCTATGCTTAGCAGTGAAATTGTGAATCTTCCAGCACTAAGTCAACCTGCATATATCTTGAAGCAGAATATGTCGAATTCGATGTCCAATGAAGAATCTCATGTATTGTTTTCAAACAATAGTGCCACTATCACAGATATCCAAGGCAGATAA 2493 0.3807 MGSNGNISLLCLSIIFCCLCLDSVTALNTISSSQLMKDPETISSNNDMFTLGFFSPQNNTNRYVGIWYKTRTLLVWICNRNQPLHDSKGSLTISEDGNLVVLNATKHVIWSTNVSNISPNSNTSAQLLDSGNLVLIENATGKAIWKSFLHPSNVFMPNMQLITNKRTGERVEGTSWKSPSDPSFGSFSLSLERPKIPEIFIWEGTRPHWRSGPWNGRVFTGIPTMQSVYNLNGFSVLVEGDYSVQLSFSPANNDMLVLYMMDWKGKIQEMIWKNDKTQWEVLFTVQETDCEVYGICGAYGSCSSKAKPICNCLRGFEPRIEEEWNRQNWTSGCVRKKSLQCENSDVNSKKDGFLKLEKVKVPDLADWSSARLEEKCRSQCLENCTCTAYSYDAGIGCLSWSGNLIDIQQFSSGGIDLYIRVANSELDKERGATFIIAAITVIVALVIIVTCAYVMWKYFGRERKKRKLSLFSCCKGSAEKTNDSIIGELSQVKLQELLLFDAEKLANATDDFNFSNKLGEGGFGPVYKGKLENGQEIAVKRLSRASGQGLEEFMNEVVLISKLQHRNLVRLLGCCREGDENMLIYEYMPNKSLDTFIFDPPEHKFLDWKNRFSIIEGTARGLLYLHRDSRLRIIHRDLKASNILLDDELNPKISDFGLARIFGGHGDQDKTRRVVGTYGYMAPEYAMGGLFSEKSDVFSFGVLVLEIVSGKRNSSFYNNDQSISLLEFAWNLWNEDRILSLIDQHICDPVDENDILRCVHIGLLCVQESARNRPNMATVISMLSSEIVNLPALSQPAYILKQNMSNSMSNEESHVLFSNNSATITDIQGR* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0990 830 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 21 829 - -
Lan19g0990 830 ProSiteProfiles Protein kinase domain profile. 512 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0990 830 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 829 - -
Lan19g0990 830 SMART blect_4 33 151 IPR001480 -
Lan19g0990 830 SMART ntp_6 348 421 IPR003609 -
Lan19g0990 830 Pfam PAN-like domain 347 407 IPR003609 -
Lan19g0990 830 ProSiteProfiles PAN/Apple domain profile. 341 422 IPR003609 -
Lan19g0990 830 Pfam Protein tyrosine and serine/threonine kinase 513 783 IPR001245 GO:0004672|GO:0006468
Lan19g0990 830 CDD B_lectin 33 151 IPR001480 -
Lan19g0990 830 ProSiteProfiles Bulb-type lectin domain profile. 27 148 IPR001480 -
Lan19g0990 830 Pfam S-locus glycoprotein domain 209 319 IPR000858 GO:0048544
Lan19g0990 830 Gene3D Phosphorylase Kinase; domain 1 487 587 - -
Lan19g0990 830 Gene3D - 23 148 IPR036426 -
Lan19g0990 830 Pfam D-mannose binding lectin 74 177 IPR001480 -
Lan19g0990 830 CDD PAN_AP_plant 339 422 - -
Lan19g0990 830 SUPERFAMILY Protein kinase-like (PK-like) 498 819 IPR011009 -
Lan19g0990 830 PIRSF SRK 4 830 IPR024171 GO:0004674
Lan19g0990 830 Gene3D Transferase(Phosphotransferase) domain 1 588 791 - -
Lan19g0990 830 CDD STKc_IRAK 518 783 - -
Lan19g0990 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Lan19g0990 830 SMART serkin_6 512 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0990 830 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 216 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0990 Lan-Chr19 17262141 17265460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0990 496 801 Receptor kinase-like Gene Family AT4G23230 57.843 2.35e-120 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan19g0990 PK_Tyr_Ser-Thr 3.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0990 - - vun:114184390 973.385