Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0989 ATGAACATAAGCTTGTTATCAATTCTGATTATATTTCATTGCCTATGTTTACATTATGGTATTGCCATAAACAACATTACTTCATCTCAATCTATGAATGATTCTGAGACTCTAAGTTCCAATGGTTTCACTTTAGGATTTCTAAGTCCTCCAAATTCTACAAACCGTTATGTTGGAATTTGGTACATGTCTGAATCCACTGTAGTATGGGTAGCTAACAGAAACCAACCACTCATAGATTCTTCAGGAAGTTTTTCAATATCTGAAGATGGAAATCTTGTGGTTATGAATGGAACCAAAAAGGTTATTTGGTCATCAAATGTATCAAACATTGCAACAAATTCTACTTGCCAACTTTTGGATTCTGGTAACCTTGTTCTTATGGATAGTGCAGGAGATAAAGTATGGGAGAGTTTTAAGAATCCTACTGATACTTTGCTCCCAAACATGAAGATTACAAACAACAAAAACACTGGTGAGAAAGTTGAACTAACATCATGGAAAAGCCCTTCTGATCCATCCATTGGAAGCTTCTCTCTCAGTATTGAGCCCCTTAATATTCCAGAAGGTTTCATTTGGAATGAAACTCTTCCATATTGGCGTACCGGCCCGTGGACCGGTCAGGTTTTTTTAGGGATACCTATGATGAATTCTTCATATCTTAATGGATATAGATTAGACTATGAAGAAGATGGAACTGTGTATCTCACTTTTACTTATTCAAATGAGTCTTTTTTGGCAGTGTTTGTTTTGGACTGGCAGGGCAAGTTTGAGCAAAGATTTTGGGATCATGAGAAGAAGGAATGGCAAGTTGGATGGAAAGCTCAATCATCTGAGTGTGATGTTTATGGAATATGTGGTCCATTTGGAATCTGTAGTATAGAAAGTTCACCAATATGCACATGTTTGGAAGGGTTTGAACCAAGTAACATAGAAGAATGGAATAGTAACAATTGGACTAATGGATGTGTTAATAGGAGGACAGAACTACAATGTGAAAGTGCAAAAACTCAAAATGGAAGTGTAAATAGTAAAGAGGATGGGTTTGAGAAACTTGAGATGATAAAAGTTCCTCAAGTTTCAGCTTTTTCATGGCTCAAAACAGAAGACTCATGCAGAAGCCAGTGCATGGAAAACTGCACTTGTATTGCATATTCTTTTGATGAAGAGTTTGGTTGTATGACATGGATTGATAATCTAACTGACATACAACAATTTCCAAGTGGAGGCACTGATCTTTACATTAGACTAGCTAATTCAGAACTTAGTATCAATGATAATGAGAAAGATTCCAAGACCACCATCATTATTATTACTATAACAGTAATAGTAGGAACAATTATACTTGTCACCTCTGCATATTTCTTGTGGAAACGCTCTGCTAGAAAAAGGAAGATAAATGGATTCTCTCGGTTCAATAGAGGTGAAACAATAGATGTAAATACAAGCGACATGAAAATTGAAGTGCAATCAGAAGTGGAACTGCAGGAGCTACTGCTATTTGATACCGAAAAACTTGCAGTCGCCACGAACAACTTCGACTTGTCCAACAAACTTGGGCAGGGTGGTTTTGGACCAGTATATAAGGGAAAACTGAAAGATGGTCAGGAAGTAGCAGTTAAAAGACTTTCTAAAGCATCAGGACAAGGACTAGAAGAATTTATGAATGAGGTTGTTGTGATTTCTAAGCTTCAACACCGGAATCTAGTAAGACTTCTAGGTTGTTGTAGAGAAGGAGATGAAAAGATGTTGATCTATGAGTACATGGCTAACAAAAGTTTGGACAAATTTGTTTTTGGTCCACCTCAGCATAAATTTCTCGATTGGGGAAAACGCTTCAACATAATAGAAGGAATAGCTCGGGGTTTACTTTATCTTCATAGAGATTCTAGACTAAGAATCATTCATAGAGATTTAAAAGCAAGCAATATTTTGTTGGATGAGGAGCTGAATCCAAAAATATCAGATTTTGGTTTGGCTAGAATATTTGGAGGGCATCGAGATGAGGCTAATACAGCAAGGGTTGTTGGAACATACGGCTATATGGCACCTGAGTACGCAATGGAAGGATTATTTTCGGAAAAATCAGATGTCTTTAGTTTTGGAGTTCTGCTACTAGAGATTGTTAGTGGAAAAAAAAACTCTAGCTTTTATAACAATGAGGAGTCTCAAAGTCTTCTAGGATTCGTATGGAACCTATGGAATGAAGATAATATTGTATCTATAATAGATGAAGGCATATATGACCCTATGAAAGAGAGGGATATTTTGAGATGTGTACACATAGGACTATTGTGTGTGCAAGAAAGTGCAAGAGATAGGCCTAATATGGCAACTGTGATTTCTATGCTTAACAGTGAAATTGTGAATCTCCCTCAGCCAAAGCAACCTGCATTCATTGAGAGGAGGAACATTATAAATTCATTGTCTTCTGAAGAATGTCATACATTGTTTTCAAACAACATTGTTACACTTACAAATATCCAAGGCAGATAA 2496 0.3654 MNISLLSILIIFHCLCLHYGIAINNITSSQSMNDSETLSSNGFTLGFLSPPNSTNRYVGIWYMSESTVVWVANRNQPLIDSSGSFSISEDGNLVVMNGTKKVIWSSNVSNIATNSTCQLLDSGNLVLMDSAGDKVWESFKNPTDTLLPNMKITNNKNTGEKVELTSWKSPSDPSIGSFSLSIEPLNIPEGFIWNETLPYWRTGPWTGQVFLGIPMMNSSYLNGYRLDYEEDGTVYLTFTYSNESFLAVFVLDWQGKFEQRFWDHEKKEWQVGWKAQSSECDVYGICGPFGICSIESSPICTCLEGFEPSNIEEWNSNNWTNGCVNRRTELQCESAKTQNGSVNSKEDGFEKLEMIKVPQVSAFSWLKTEDSCRSQCMENCTCIAYSFDEEFGCMTWIDNLTDIQQFPSGGTDLYIRLANSELSINDNEKDSKTTIIIITITVIVGTIILVTSAYFLWKRSARKRKINGFSRFNRGETIDVNTSDMKIEVQSEVELQELLLFDTEKLAVATNNFDLSNKLGQGGFGPVYKGKLKDGQEVAVKRLSKASGQGLEEFMNEVVVISKLQHRNLVRLLGCCREGDEKMLIYEYMANKSLDKFVFGPPQHKFLDWGKRFNIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGLARIFGGHRDEANTARVVGTYGYMAPEYAMEGLFSEKSDVFSFGVLLLEIVSGKKNSSFYNNEESQSLLGFVWNLWNEDNIVSIIDEGIYDPMKERDILRCVHIGLLCVQESARDRPNMATVISMLNSEIVNLPQPKQPAFIERRNIINSLSSEECHTLFSNNIVTLTNIQGR* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0989 831 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Lan19g0989 831 CDD STKc_IRAK 519 785 - -
Lan19g0989 831 CDD B_lectin 29 142 IPR001480 -
Lan19g0989 831 CDD PAN_AP_plant 328 418 - -
Lan19g0989 831 Pfam PAN-like domain 344 403 IPR003609 -
Lan19g0989 831 PANTHER - 7 814 - -
Lan19g0989 831 SMART ntp_6 344 417 IPR003609 -
Lan19g0989 831 Gene3D - 21 140 IPR036426 -
Lan19g0989 831 SUPERFAMILY alpha-D-mannose-specific plant lectins 58 173 IPR036426 -
Lan19g0989 831 SUPERFAMILY Protein kinase-like (PK-like) 498 817 IPR011009 -
Lan19g0989 831 Pfam Domain of unknown function (DUF3403) 786 831 IPR021820 GO:0004674
Lan19g0989 831 PIRSF SRK 1 831 IPR024171 GO:0004674
Lan19g0989 831 ProSiteProfiles PAN/Apple domain profile. 332 418 IPR003609 -
Lan19g0989 831 ProSiteProfiles Protein kinase domain profile. 513 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0989 831 Gene3D Transferase(Phosphotransferase) domain 1 589 796 - -
Lan19g0989 831 Pfam D-mannose binding lectin 67 168 IPR001480 -
Lan19g0989 831 SMART serkin_6 513 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0989 831 Gene3D Phosphorylase Kinase; domain 1 475 588 - -
Lan19g0989 831 Pfam S-locus glycoprotein domain 200 309 IPR000858 GO:0048544
Lan19g0989 831 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 7 814 - -
Lan19g0989 831 SMART blect_4 29 142 IPR001480 -
Lan19g0989 831 ProSiteProfiles Bulb-type lectin domain profile. 23 140 IPR001480 -
Lan19g0989 831 Pfam Protein tyrosine and serine/threonine kinase 515 784 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0989 Lan-Chr19 17256964 17260393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0989 425 802 Receptor kinase-like Gene Family AT4G23190 48.556 2.35e-125 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan19g0989 PK_Tyr_Ser-Thr 4.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0989 - - vun:114184390 1008.44