Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0987 ATGAAGAAGTGTGAACTATGTAACTGTCCAGCAAAGTTGTTCTGTGAATCAGATGAAGCCACCCTTTGTTGGGAATGTGATGCAAAGGTTCACAGTGCAAACTTTCTTGTCACCAAACATCAAAGGTTTCTTCTTTGCCATGTTTGTCAATCACTCACACCTTGGCATGCTTCTGGTCCCAAGTTTGTACCCACCATCTCTTTTTGTAATGAATGTGTCAGAAACAATAACCAAGACAATGATTATGATGAAGATGATGATGATGATGATGATGATATAGAAAATGATGAAGATGAAGAAGAAAATCAAGTGGTTCCATGGACATGTACAACTCCACCACCACTTTCAAGCTCTTCAAATAGTGCAACTAGTTCTACAAGGTTCTCTAATGGTGAAGAAGGAGCAACAGATTAA 414 0.3865 MKKCELCNCPAKLFCESDEATLCWECDAKVHSANFLVTKHQRFLLCHVCQSLTPWHASGPKFVPTISFCNECVRNNNQDNDYDEDDDDDDDDIENDEDEEENQVVPWTCTTPPPLSSSSNSATSSTRFSNGEEGATD* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0987 137 MobiDBLite consensus disorder prediction 104 137 - -
Lan19g0987 137 Pfam B-box zinc finger 2 42 IPR000315 GO:0008270
Lan19g0987 137 MobiDBLite consensus disorder prediction 76 137 - -
Lan19g0987 137 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 130 - -
Lan19g0987 137 SMART bboxneu5 1 45 IPR000315 GO:0008270
Lan19g0987 137 MobiDBLite consensus disorder prediction 80 103 - -
Lan19g0987 137 CDD Bbox1_BBX-like 3 45 - -
Lan19g0987 137 PANTHER B-BOX TYPE ZINC FINGER PROTEIN 1 130 - -
Lan19g0987 137 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0987 Lan-Chr19 17250516 17251209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0987 2 102 C2C2-CO-like Transcription Factor Family AT4G27310 48.077 1.70e-31 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan19g0987 zf-B_box 5.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0987 - - ccaj:109788364 165.236