Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0963 ATGGGTTCCAAGAATTTGGTGTTGCATGTCCGAATTTTTGTCATGTCCATGTTGATTCTCACTGGAACTTTCTGTGTTGGGGATACTGATATTGTTGATGTTGAAGCAATCAATAATCTATACATTGCTCTAGGCGCACCACCTCTTAAAGGGTGGAAGCCTGTGGGAGGAGATCCATGTTTCGAGGCGTGGCAAGGCGTGGCTTGTGTCTTGTCCAGAATAACTGCCATAAACCTCCCAAGCATGAACTTGAATGGAGAACTCGGAAGTAATTTGAATTTCCCATCCATCATACAAATTGATCTTAGCAACAACCACATTGGAGGGCTCATTCCATTTAATTTGCCCCGGACTCTGATAACCTTGTCTCTATCAGGAAATCGGTTAAATGGAAGCATTCCGGATGGTTTTTCCTCATTGCCTCAATTGACAAGCCTGGATTTGTCAAGCAACAACTTGAGCGGTCAGCTGCCTTCCTCACTACGAATTTTATCATCCCTTACCACATTACAATTGCAGAACAATCAACTTTCTGGAAAACTTGATGTTTTGCAGAACCTGCCTCTTCGGGATCTGAATATCGAGAATAATTTATTCTCTGGTCCGATTCCTCCCAAATTGTTGACCATCCCAAATTTCAGAAAAGTTGGGAATCCTTTTAATACTACTATTATTCCACCGCCTCCTGCCACAGCCCATTCACCTGTAGCTACGGCTCCATCCTCCAGTGGATCACCTCAGAAAGCGCCAACTAGTCCATCTACGACAGAAACAACGCTTGCAAGTATTTTGAAGTCTTTCATAGCTGAAAATGTCATTTGGATCGTTGGTGCAGGTGTTTTAATATTGATTGCAATAGGAGCATGTCTTCTTATGTTTTGGTGCTTTAAGAGAAGGTCAGTAAAGAAACATGATGCGGTTTTCGAAGCAAGTAGTCAAGAGGAGAACGCAGATGAGAAACCATCACCTGTACATGAGGTACCAAATAGAAAAACAAATTCGATTCTGAAGGTTCGAGATGGACAAGAAATATCAGTGAAAATAGCATCTACAACTTCTGAAAGTAATGCTCGCGTCGATTCCAAATTTCCACCCCTGCAGCCACCTCCAAATCCAATCCCAACTATTCCTGCTAAGAAGGTCGTCTTCGATCCGGCTATACCTACGAGTGCAACTGAAGGAGATGCTATGACAAGTAACGTAAAAGTTTATACTGTTGCATTACTTCAGCAGTATACAAATAGTTTTTCTCAAGAGAACTTTATTGGGAAAGGCACACTTGGACCTGTTTATAGGGCTGAGCTCCTTGATGGAAAGCTCTTGGCAGTGAGGAAACTGGATGCTACTGCTTCTGTGGGGCAGAATCATGAACAATTTCTTCAAACGGTGTCCAGCATCTCAAAAATTCAACACTCTAATATTGTACAGTTCCTGGGTTACTGTGATGAGTATAACCAACGATTGCTTGTATACGAGTATTGCAGTAATGGAACCCTATATGATGCACTGCATGGGGATGATGAATGCCGTATAGAACTTCCATGGAATGCACGCATTCGTGTGGCACTCGGAATTGCGAGAGCTTTAGAGTATCTTCATGAGACCTTCCGGCCACCTATCGTCCATCGAAATTTTAAGTCTGCTAATGTTCTCCTGAATGACAACCTGGAAGTGCGTGTCTCTGATTGTGGATTAGATCCTATACTCTCTTCCGGCCATGCTGGTCAGATGTCCGGACGCCTCCTCACAGCTTTTGGTTACAGTGCACCAGAATTCGAGTCTGGAACATATACACAACAAAGTGATGTCTTCAGTTTTGGAGTTGTGATGCTAGAACTTCTCACTGGACGAAAATCCTTCGATAAGACAAGGCCTCGTGGAGAGCAAATATTGGTCAGATGGGCAGTCCCTCAACTACATGACATCGATACATTGTCAAAAATGGTTGACCCCAACTTAAAGGGCGCCTATCCTATGAAGTCCTTGTCGCGTTTGGCAGATATTGTTTCCTCGTGTGTACAGCATGAACCTGAATTCCGGCCAGCAATGTCCGAAATTGTTCAAGATCTCGGGCGAATGATGTAA 2085 0.4336 MGSKNLVLHVRIFVMSMLILTGTFCVGDTDIVDVEAINNLYIALGAPPLKGWKPVGGDPCFEAWQGVACVLSRITAINLPSMNLNGELGSNLNFPSIIQIDLSNNHIGGLIPFNLPRTLITLSLSGNRLNGSIPDGFSSLPQLTSLDLSSNNLSGQLPSSLRILSSLTTLQLQNNQLSGKLDVLQNLPLRDLNIENNLFSGPIPPKLLTIPNFRKVGNPFNTTIIPPPPATAHSPVATAPSSSGSPQKAPTSPSTTETTLASILKSFIAENVIWIVGAGVLILIAIGACLLMFWCFKRRSVKKHDAVFEASSQEENADEKPSPVHEVPNRKTNSILKVRDGQEISVKIASTTSESNARVDSKFPPLQPPPNPIPTIPAKKVVFDPAIPTSATEGDAMTSNVKVYTVALLQQYTNSFSQENFIGKGTLGPVYRAELLDGKLLAVRKLDATASVGQNHEQFLQTVSSISKIQHSNIVQFLGYCDEYNQRLLVYEYCSNGTLYDALHGDDECRIELPWNARIRVALGIARALEYLHETFRPPIVHRNFKSANVLLNDNLEVRVSDCGLDPILSSGHAGQMSGRLLTAFGYSAPEFESGTYTQQSDVFSFGVVMLELLTGRKSFDKTRPRGEQILVRWAVPQLHDIDTLSKMVDPNLKGAYPMKSLSRLADIVSSCVQHEPEFRPAMSEIVQDLGRMM* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0963 694 Gene3D Phosphorylase Kinase; domain 1 386 493 - -
Lan19g0963 694 MobiDBLite consensus disorder prediction 225 255 - -
Lan19g0963 694 Coils Coil 167 187 - -
Lan19g0963 694 Pfam Leucine rich repeat 100 153 IPR001611 GO:0005515
Lan19g0963 694 MobiDBLite consensus disorder prediction 310 333 - -
Lan19g0963 694 ProSiteProfiles Protein kinase domain profile. 416 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0963 694 SUPERFAMILY Protein kinase-like (PK-like) 398 690 IPR011009 -
Lan19g0963 694 MobiDBLite consensus disorder prediction 349 373 - -
Lan19g0963 694 ProSiteProfiles Leucine-rich repeat profile. 166 188 IPR001611 GO:0005515
Lan19g0963 694 SUPERFAMILY L domain-like 39 212 - -
Lan19g0963 694 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 9 146 - -
Lan19g0963 694 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 392 694 - -
Lan19g0963 694 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 135 317 - -
Lan19g0963 694 PANTHER LEUCINE RICH REPEAT KINASE 2 392 694 - -
Lan19g0963 694 PANTHER LEUCINE RICH REPEAT KINASE 2 135 317 - -
Lan19g0963 694 PANTHER LEUCINE RICH REPEAT KINASE 2 9 146 - -
Lan19g0963 694 Gene3D Ribonuclease Inhibitor 36 228 IPR032675 -
Lan19g0963 694 PRINTS Leucine-rich repeat signature 143 156 - -
Lan19g0963 694 PRINTS Leucine-rich repeat signature 164 177 - -
Lan19g0963 694 Pfam Protein tyrosine and serine/threonine kinase 419 690 IPR001245 GO:0004672|GO:0006468
Lan19g0963 694 Gene3D Transferase(Phosphotransferase) domain 1 494 694 - -
Lan19g0963 694 MobiDBLite consensus disorder prediction 235 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0963 Lan-Chr19 17008854 17015021 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0963 33 694 Strubbelig Receptor Gene Family AT4G03390 48.522 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lan19g0963 PK_Tyr_Ser-Thr 1.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0963 - - ahf:112783685 942.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0963 19 17008854 17015021 Lan16g0119 16 932605 996232 LSH