Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan19g0958 | ATGTATCACATGGATTCATCTTCAGGGTCTCAATTTCAACACCTTCATCTACCTCCAGGATTTCGGTTCCACCCAACAGATGAAGAACTTGTTGTTCAGTACCTCAAGAAAAAAGCAACATCTGTTCCTATTCCTGTTGCCATCATAGCCGAGATTGATCTCTACAAGTTCGATCCATGGGAGCTCCCAAGTAAAGCAACGTTTGGTGAACAAGAATGGTATTTCTTCACCACAAGGGATAGGAAATACCCAAATGGAGCGAGACCAAATAGGGCTGCAACTTCTGGATATTGGAAAGCTACTGGAACAGACAAGCCTATACTAGCATCTAATAGAAACCAGAAAGTTGGAGTTAAGAAAGCCCTTGTTTTCTATGGTGGGAAGCCTCCAAAAGGGGTTAAAACCAATTGGATTATGCATGAGTATAGGCTTGCTGATAATCCCTCAAAGCCTCCTTCTCTAATTGTTGATCCAGGACACAACACTGAGAAGAACGCCTCGAAGCTTGACGATTGGGTTTTGTGCCGAATATACAAGAAAAGCAATAGTACTACTAGCTTTTTAAGGCCACCTATGATTAAGGAAAAGGAGCTTTCTATGGAGGCTATGTTACCAACAATGTCAACTTTGACAATGACTAATAATACTTATCAGAATTCCAAACCATCATCTTCAAGAACCGAAAGTTATGGGCCACCATTGGGACTAGAAAATGATAATAACTTTTTAGATGGAATCTTAGCTGCAACAACTCATGATCATCAAAGCATGCAAAATGCAAATTCTGATTCTCACATAGTTTCTTCAAACTCAAAGGGTACTACCAATACTAACTCCCCTATGAAAAGAGCACTACCTTCTAAATCACAGTTTTGGAATGAGACAGGTGGGTCTCCAGGATCATCTTCTTCAAGCAAGAGATTCCATTCTGATCTTAATAACCCTGAGGAAAATATTTCCTTTCTTTCTCTACTTAGCCAACTTCCTCAGAACACAACTTTTCACCCAAATGCACTCCTTGGAAATGTTGGTGATAGTGTAATGAGGCAACAGTTTCAACTTCCAAGCATGAATTGGAATTAA | 1083 | 0.3989 | MYHMDSSSGSQFQHLHLPPGFRFHPTDEELVVQYLKKKATSVPIPVAIIAEIDLYKFDPWELPSKATFGEQEWYFFTTRDRKYPNGARPNRAATSGYWKATGTDKPILASNRNQKVGVKKALVFYGGKPPKGVKTNWIMHEYRLADNPSKPPSLIVDPGHNTEKNASKLDDWVLCRIYKKSNSTTSFLRPPMIKEKELSMEAMLPTMSTLTMTNNTYQNSKPSSSRTESYGPPLGLENDNNFLDGILAATTHDHQSMQNANSDSHIVSSNSKGTTNTNSPMKRALPSKSQFWNETGGSPGSSSSSKRFHSDLNNPEENISFLSLLSQLPQNTTFHPNALLGNVGDSVMRQQFQLPSMNWN* | 361 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan19g0958 | 360 | MobiDBLite | consensus disorder prediction | 256 | 312 | - | - | |
Lan19g0958 | 360 | PANTHER | NAC TRANSCRIPTION FACTOR 56 | 4 | 314 | - | - | |
Lan19g0958 | 360 | MobiDBLite | consensus disorder prediction | 213 | 231 | - | - | |
Lan19g0958 | 360 | PANTHER | NAC TRANSCRIPTION FACTOR-LIKE PROTEIN | 4 | 314 | - | - | |
Lan19g0958 | 360 | Pfam | No apical meristem (NAM) protein | 18 | 144 | IPR003441 | GO:0003677|GO:0006355 | |
Lan19g0958 | 360 | MobiDBLite | consensus disorder prediction | 213 | 237 | - | - | |
Lan19g0958 | 360 | Gene3D | NAC domain | 26 | 185 | IPR036093 | GO:0003677|GO:0006355 | |
Lan19g0958 | 360 | ProSiteProfiles | NAC domain profile. | 17 | 180 | IPR003441 | GO:0003677|GO:0006355 | |
Lan19g0958 | 360 | SUPERFAMILY | NAC domain | 5 | 180 | IPR036093 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan19g0958 | Lan-Chr19 | 16923512 | 16925183 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan19g0958 | 5 | 360 | NAC Transcription Factor Family | AT1G61110 | 52.162 | 1.03e-110 | 324 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NAC | Lan19g0958 | NAM | 1.4e-38 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan19g0958 | - | - | gmx:100792372 | 469.929 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lan17g0692 | 17 | 6100070 | 6102492 | Lan19g0958 | 19 | 16923512 | 16925183 | PCT | |
Lan19g0958 | 19 | 16923512 | 16925183 | Lan17g0692 | 17 | 6100070 | 6102492 | PCT |