Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0958 ATGTATCACATGGATTCATCTTCAGGGTCTCAATTTCAACACCTTCATCTACCTCCAGGATTTCGGTTCCACCCAACAGATGAAGAACTTGTTGTTCAGTACCTCAAGAAAAAAGCAACATCTGTTCCTATTCCTGTTGCCATCATAGCCGAGATTGATCTCTACAAGTTCGATCCATGGGAGCTCCCAAGTAAAGCAACGTTTGGTGAACAAGAATGGTATTTCTTCACCACAAGGGATAGGAAATACCCAAATGGAGCGAGACCAAATAGGGCTGCAACTTCTGGATATTGGAAAGCTACTGGAACAGACAAGCCTATACTAGCATCTAATAGAAACCAGAAAGTTGGAGTTAAGAAAGCCCTTGTTTTCTATGGTGGGAAGCCTCCAAAAGGGGTTAAAACCAATTGGATTATGCATGAGTATAGGCTTGCTGATAATCCCTCAAAGCCTCCTTCTCTAATTGTTGATCCAGGACACAACACTGAGAAGAACGCCTCGAAGCTTGACGATTGGGTTTTGTGCCGAATATACAAGAAAAGCAATAGTACTACTAGCTTTTTAAGGCCACCTATGATTAAGGAAAAGGAGCTTTCTATGGAGGCTATGTTACCAACAATGTCAACTTTGACAATGACTAATAATACTTATCAGAATTCCAAACCATCATCTTCAAGAACCGAAAGTTATGGGCCACCATTGGGACTAGAAAATGATAATAACTTTTTAGATGGAATCTTAGCTGCAACAACTCATGATCATCAAAGCATGCAAAATGCAAATTCTGATTCTCACATAGTTTCTTCAAACTCAAAGGGTACTACCAATACTAACTCCCCTATGAAAAGAGCACTACCTTCTAAATCACAGTTTTGGAATGAGACAGGTGGGTCTCCAGGATCATCTTCTTCAAGCAAGAGATTCCATTCTGATCTTAATAACCCTGAGGAAAATATTTCCTTTCTTTCTCTACTTAGCCAACTTCCTCAGAACACAACTTTTCACCCAAATGCACTCCTTGGAAATGTTGGTGATAGTGTAATGAGGCAACAGTTTCAACTTCCAAGCATGAATTGGAATTAA 1083 0.3989 MYHMDSSSGSQFQHLHLPPGFRFHPTDEELVVQYLKKKATSVPIPVAIIAEIDLYKFDPWELPSKATFGEQEWYFFTTRDRKYPNGARPNRAATSGYWKATGTDKPILASNRNQKVGVKKALVFYGGKPPKGVKTNWIMHEYRLADNPSKPPSLIVDPGHNTEKNASKLDDWVLCRIYKKSNSTTSFLRPPMIKEKELSMEAMLPTMSTLTMTNNTYQNSKPSSSRTESYGPPLGLENDNNFLDGILAATTHDHQSMQNANSDSHIVSSNSKGTTNTNSPMKRALPSKSQFWNETGGSPGSSSSSKRFHSDLNNPEENISFLSLLSQLPQNTTFHPNALLGNVGDSVMRQQFQLPSMNWN* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0958 360 MobiDBLite consensus disorder prediction 256 312 - -
Lan19g0958 360 PANTHER NAC TRANSCRIPTION FACTOR 56 4 314 - -
Lan19g0958 360 MobiDBLite consensus disorder prediction 213 231 - -
Lan19g0958 360 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 4 314 - -
Lan19g0958 360 Pfam No apical meristem (NAM) protein 18 144 IPR003441 GO:0003677|GO:0006355
Lan19g0958 360 MobiDBLite consensus disorder prediction 213 237 - -
Lan19g0958 360 Gene3D NAC domain 26 185 IPR036093 GO:0003677|GO:0006355
Lan19g0958 360 ProSiteProfiles NAC domain profile. 17 180 IPR003441 GO:0003677|GO:0006355
Lan19g0958 360 SUPERFAMILY NAC domain 5 180 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0958 Lan-Chr19 16923512 16925183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0958 5 360 NAC Transcription Factor Family AT1G61110 52.162 1.03e-110 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan19g0958 NAM 1.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0958 - - gmx:100792372 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0692 17 6100070 6102492 Lan19g0958 19 16923512 16925183 PCT
Lan19g0958 19 16923512 16925183 Lan17g0692 17 6100070 6102492 PCT