Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0934 ATGCCAATAACAATGATCATGCACAACCACTCACATTCATTTCTTATCTTATTTCTCTTCCTTTTCAACTCAATATCAGCCACTGATTTCATCTTCAATGGCTTCAACTCCTCTAATGTGTTACTCTTTGGCAATGCAAGCATTGATTCTAGAGTTCTTACACTCACTCATAACCAAACTTTCTCAATTGGTCGTTCTCTTTACCATAAAAAAATACAAACCAAGCAACCAAACTCTTCTTACATATACCCTTTTTCCACTTCTTTCATCTTTTCCATGGCACCTTATGAAAACACTCTTCCTGGGCATGGCTTAGTTTTCATCTTCACTCCTGTCACAGGTATACAAGGTACAAGTTCTGCTCAAAATCTTGGTCTTTTTAACCTTACAAATAATGGGAATAGTAGCAACCATGTTTTTGGTGTTGAGTTTGATGTGTTCATGAACCAAGAGTTTGATGATATAAATGACAACCATGTTGGGATTGACATAAACTCTCTCACTTCTTTTGTTTCACATGATGCTGGTTATTGGCCAGATGATAGGAAAAGCAATGATGAGAGTTCTTTCAAGGAATTGATGCTTAACAATGGTGAGAATTATCAAGTTTGGATTGATTATGAAGATTCTTTGATTAATGTTACTATGGCACCAGTTGGTATGAGAAGGCCTTTGATGCCTTTATTGAATGTTTCTGTTGATTTATCTCAAGTTTTTGAGGAAGAAATGTTTGTTGGATTTACTAGTGCCACAGGGCAATTAGTCCAAAGTCACAAGATTTTGGCTTGGAGTTTTAGCAACACAAATTTTTCATTAAGTGAAGAACTCATTACTGAAGGGTTACCCTCTTTTGTTCTTCCAAAGGATTCGATTTTCGAGTCGAAGGCGTTTGTTGCTGGGATTACAGTAGGAGTTTTCTTTGTTATTTGTGTCATTGTTTTGTTGGCATTGTTTTTGATCCAGAGAATGAGAAGAAGGGCAAGGAAGAAAGAGGAAATGGAAGATTGGGAATTAGAGTATTGGCCACACAGAATGACATATGATGAAATAGAAGCAGCAACAAAGGGGTTTTGTGAGGAAAATGTGATTGGTGTTGGTGGAAATGGAAAAGTATATAAGGGTATTCTAAGAGGAGGTGCAGAGATTGCTGTGAAGAGAATCTCTCATGAAAATGATGGTATGAGAGAATTCCTAGCAGAAATTTCAAGTCTTGGAAGATTGAAGCAGAGAAACTTGGTAGGTTTAAGAGGGTGGTGCAAGAAAGATCAAGGAAACTTCTTATTAGTTTATGACTACATGGAAAATGGAAGCTTAGACAAAAGGGTGTTTCATTGTGATGAAAACAAGATGTTAAATTGTGAAGAAAGAATTAAGATTATAAAAGATGTAGCTTTTGCTGTATTATACTTGCATGAAGGTTGGGATTCTAAAGTAGTTCATAGAGACATAAAAGCCAGCAATGTGTTACTTGATAAGGATATGAATGGAAGGCTAGGAGATTTTGGTTTAGCCAGAATGCATAACCATGATCAAGTTCCAATGACAACAAAATTGGTTGGAACAGTTGGATACATGGCTCCTGAAGTTATCAAAACTGGTAGAGCATCAACTATGACAGATATTTACATGTTTGGTATACTGATTTTAGAAGTTATGTGTGGAAGGAGACCTTTAGAAGAAGATAAGCCACCTTTGGTGGAGTATGTGTGGCAATTAATGGTACAAGGGGAACTAGTTAATGCACTTGATCAAAGGATAAGGGATATAGGAGAGTTTTTCAATGTGCAAGAAGTAGAAAGGGTACTTAACTTGGGTTTGTTGTGTGCATATCCTGAACCACAAGCAAGACCAAGAATGAGACAAGTGGTGAATATTTTAGAGGGGAAGAGTGAGGGAGAGGAGTCAGAAATTGAGAATATGGATACTTATTTGCTCCAACAGTTAAAATCAAGGGATATATTGTCTGAGTATAGTCAATATTTTAGCTATGCATCACACCCTACTTTTGAAAATATTCTTGAATCTTCCTCAACATATCTCACTTGGTCCAAATCTATAGTTGAAGAGGGTAGGTGA 2076 0.3656 MPITMIMHNHSHSFLILFLFLFNSISATDFIFNGFNSSNVLLFGNASIDSRVLTLTHNQTFSIGRSLYHKKIQTKQPNSSYIYPFSTSFIFSMAPYENTLPGHGLVFIFTPVTGIQGTSSAQNLGLFNLTNNGNSSNHVFGVEFDVFMNQEFDDINDNHVGIDINSLTSFVSHDAGYWPDDRKSNDESSFKELMLNNGENYQVWIDYEDSLINVTMAPVGMRRPLMPLLNVSVDLSQVFEEEMFVGFTSATGQLVQSHKILAWSFSNTNFSLSEELITEGLPSFVLPKDSIFESKAFVAGITVGVFFVICVIVLLALFLIQRMRRRARKKEEMEDWELEYWPHRMTYDEIEAATKGFCEENVIGVGGNGKVYKGILRGGAEIAVKRISHENDGMREFLAEISSLGRLKQRNLVGLRGWCKKDQGNFLLVYDYMENGSLDKRVFHCDENKMLNCEERIKIIKDVAFAVLYLHEGWDSKVVHRDIKASNVLLDKDMNGRLGDFGLARMHNHDQVPMTTKLVGTVGYMAPEVIKTGRASTMTDIYMFGILILEVMCGRRPLEEDKPPLVEYVWQLMVQGELVNALDQRIRDIGEFFNVQEVERVLNLGLLCAYPEPQARPRMRQVVNILEGKSEGEESEIENMDTYLLQQLKSRDILSEYSQYFSYASHPTFENILESSSTYLTWSKSIVEEGR* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0934 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 478 490 IPR008271 GO:0004672|GO:0006468
Lan19g0934 691 CDD lectin_legume_LecRK_Arcelin_ConA 28 268 IPR001220 GO:0030246
Lan19g0934 691 Gene3D Transferase(Phosphotransferase) domain 1 433 651 - -
Lan19g0934 691 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 10 677 - -
Lan19g0934 691 ProSitePatterns Protein kinases ATP-binding region signature. 363 385 IPR017441 GO:0005524
Lan19g0934 691 SMART serkin_6 357 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0934 691 Pfam Protein kinase domain 359 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0934 691 PANTHER - 10 677 - -
Lan19g0934 691 Gene3D - 26 276 - -
Lan19g0934 691 Gene3D Phosphorylase Kinase; domain 1 318 432 - -
Lan19g0934 691 SUPERFAMILY Protein kinase-like (PK-like) 333 627 IPR011009 -
Lan19g0934 691 Pfam Legume lectin domain 28 270 IPR001220 GO:0030246
Lan19g0934 691 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 271 IPR013320 -
Lan19g0934 691 ProSiteProfiles Protein kinase domain profile. 357 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0934 Lan-Chr19 16711455 16713689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0934 23 573 Receptor kinase-like Gene Family AT4G04960 66.367 0.0 734
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lan19g0934 Pkinase 3.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0934 - - gmx:100804391 1102.81