Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0919 ATGTTGATGGCTTCATCTTCTTCTACATCACGTGAGGGACACTACAGAGGAGTTAGAAAGAGACCATGGGGTCGCTACGCTGCTGAGATACGCGATCCTTGGAAGAAGACACGTGTTTGGTTAGGAACCTTTGATACTCCTCAAGAAGCTGCACTTGCTTACGACGGCGCCGCTCGTTCCCTCCGTGGTGCTAAGGCCAAGACCAACTTTCCTCCGCCACCGTTACCCCCTCCTGGACTCTGCCTTGACCTTAACGTTCCTTCATCTGTAGTTCATTCTCGTGCACCTTTTCTCACTGATTTTCTTCATACCGGTGTTGATCCCTTACCTTTTCTTCCTCCGCCGCCGCCGCTTCACCACCACAGGGTTGCTGTTGGTGGCGGAACCCAGCTTGGTGAGAGTTCAGAGACGGCGTCGTATATGGGACTCGTTCGACGTGGCATACCCATTGATCTGAATGAACCTCCACCGTTTTGGCTTTGA 483 0.5238 MLMASSSSTSREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPQEAALAYDGAARSLRGAKAKTNFPPPPLPPPGLCLDLNVPSSVVHSRAPFLTDFLHTGVDPLPFLPPPPPLHHHRVAVGGGTQLGESSETASYMGLVRRGIPIDLNEPPPFWL* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0919 160 CDD AP2 14 70 IPR001471 GO:0003700|GO:0006355
Lan19g0919 160 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 12-LIKE 9 147 - -
Lan19g0919 160 Pfam AP2 domain 14 63 IPR001471 GO:0003700|GO:0006355
Lan19g0919 160 SMART rav1_2 14 77 IPR001471 GO:0003700|GO:0006355
Lan19g0919 160 SUPERFAMILY DNA-binding domain 14 71 IPR016177 GO:0003677
Lan19g0919 160 ProSiteProfiles AP2/ERF domain profile. 14 71 IPR001471 GO:0003700|GO:0006355
Lan19g0919 160 PRINTS Ethylene responsive element binding protein signature 15 26 IPR001471 GO:0003700|GO:0006355
Lan19g0919 160 PRINTS Ethylene responsive element binding protein signature 37 53 IPR001471 GO:0003700|GO:0006355
Lan19g0919 160 Gene3D AP2/ERF domain 14 72 IPR036955 GO:0003700|GO:0006355
Lan19g0919 160 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 9 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0919 Lan-Chr19 16584865 16585721 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0919 5 160 AP2-EREBP Transcription Factor Family AT1G28360 44.845 4.20e-43 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan19g0919 AP2 5.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0919 - - cam:101504196 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0919 19 16584865 16585721 Lan16g0154 16 1210608 1211487 LSH