Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0914 ATGGAAGCTGGAGCAGAGAACAATACTCAGAAGAGGAATGAAGAAAGTGGCAATAGCAGTGAGAATAACAATGGAAGTAACAGCAAAATCGCGAATTCAAATGAGGGTCAGAGTAGAACCAAGCGTCAAATGAAAACCCCATTTCAGCTTGAAATGCTAGAGAAAGCTTATGCTATGGAGACTTACCCCACTGAGGAGACCAGGGCTGTGCTGTCGGAGAAGTTGGGGCTGTCGGATCGGCAGTTGCAGATGTGGTTCTGCCACCGGAGGTTGAAGGACAAGAAGGACTCACAGCAAAAGAAGCTGCGAAAAACGGTGGTGGCCTCGACTTTGCGAGATTCCCCCATAGATGACATTAAGTTAGGTCATGAACCTGGTAATGAATATGGATACGGGTCGGGTCCTGGCTCCAGCATGTTTGCCCATCCAGAGTTGAGGAATGTGGTGCCCCGTGGAGTACCCAGGTACTATGAGTCACCACAGACTATAATGGAGCTTCGAGCAATTGCTTGTGTGGAGGCACAATTAGGGGAGCCATTTAGGGAGGATGGACCTGGTCTTGGCATAGATTTTGATCTGTTGCCTCCTGATGCTTTTGGGGCATCCATAGCTGTTACAGATCAGCAGAAGCGGCCTAGTCTTCCCTATGACAATAAAATATATGAAGGACACAGTGTTAGAACAAATAAGGTTGGTTTCCTGATCGAGGAAACTGGGAGATCGGTTTTAATGGTGTCCCCCACAACAGATGGGGTAATGATTTGA 765 0.4758 MEAGAENNTQKRNEESGNSSENNNGSNSKIANSNEGQSRTKRQMKTPFQLEMLEKAYAMETYPTEETRAVLSEKLGLSDRQLQMWFCHRRLKDKKDSQQKKLRKTVVASTLRDSPIDDIKLGHEPGNEYGYGSGPGSSMFAHPELRNVVPRGVPRYYESPQTIMELRAIACVEAQLGEPFREDGPGLGIDFDLLPPDAFGASIAVTDQQKRPSLPYDNKIYEGHSVRTNKVGFLIEETGRSVLMVSPTTDGVMI* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0914 254 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 9 231 IPR044977 GO:0006357
Lan19g0914 254 SUPERFAMILY Homeodomain-like 23 96 IPR009057 -
Lan19g0914 254 Pfam Homeodomain 39 95 IPR001356 GO:0003677
Lan19g0914 254 CDD homeodomain 39 90 IPR001356 GO:0003677
Lan19g0914 254 MobiDBLite consensus disorder prediction 1 47 - -
Lan19g0914 254 Gene3D - 22 100 - -
Lan19g0914 254 PANTHER HOMEOBOX DOMAIN PROTEIN 9 231 - -
Lan19g0914 254 MobiDBLite consensus disorder prediction 10 45 - -
Lan19g0914 254 ProSiteProfiles 'Homeobox' domain profile. 36 96 IPR001356 GO:0003677
Lan19g0914 254 SMART HOX_1 38 100 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0914 Lan-Chr19 16539900 16543016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0914 1 227 Homeobox Transcription Factor Family AT1G28420 45.161 7.83e-51 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lan19g0914 Homeodomain 2.1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0914 - - lang:109333640 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0671 4 9251209 9262932 Lan19g0914 19 16539900 16543016 LSH