Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0912 ATGCATTCCTTTCTCTTCCTATTCTCCCTCTTTCTCTTCACACCAACCCTCACACTCTCTTTAAACCAAGAAGGACTCTACCTCTACCAATTCAAACTCACCCTCTCCGACCCTGACTCCACCCTCTCCACGTGGTCCCTCCATTCCTCAAACCCATGCAACAGCAACTGGTTCGGCATAACATGTGACCCAACCAACTCAACCATAACCTCACTCGACCTCTCTAGCTCCAACCTCCGAGGCCAGTTCCAACCCTCGCTTCTGTGCCGTCTCCCGAACCTGACCTCCGTCACTTTGTTCAACAACTCCATCGACCAAACGCTCCCTTCTTCTATCTCCATATGCCAAACACTCACGCGCCTTGATTTGTCTCAGAATCTAATCACTGGGTCAATTCCTCAAACACTTTCTGAGCTTCCCAATTTAACTTATCTTGATCTTACTGGAAATAACTTCTCTGGTTCTATTCCGTTTTCGTTTGGAATGTTCCAGAAGCTTGAAACATTGTCACTTGTTTATAATCTTCTAGAAGGTTCTATCCCTTATTCTTTAGGAAACGTTACAACGCTTAGAATGCTTAACCTCTCTTTTAACCCATTTTCACCTGCTCGGGTTCCTTCTTCTCTTGGAAAATTAACAAACTTGGAAGTTCTATGGCTCTCTCAGTGTAACCTTGTGGGACCCATTCCTGAGGAGTTTGGGAATTTGAAAAGTCTTGTGGTGTTGGATCTTTCTATGAATGGTTTGGATGGGAAGATACCGAGTTCGATTACTGGGTTGACTCGGTTGTGGCAGGTTGAGTTGTTTAATAACTCGTTATCGGGTGAGTTACCGGTTGGGATGGAGAATTTAACTGCATTGAGGCTTTTTGATGCTTCGATGAATCGTTTGAGTGGGAGGATTCCTGATGAGTTGACTCGGTTACCGTTGGAGAGTCTTAACCTTTATGAGAATTCGTTTGAGGGTGAGTTGCCGGAGAGTTTGGCGGATTCGCCGAATTTATATGAGCTCAGGTTGTTTGGGAATAGGCTCTCTGGGAAGTTGCCGGAGAATTTGGGGAAGAATGCGCCTTTGAGGTTGATTGATGTTTCGAATAATCAATTCTCCGGTGAGATTCCGGCAAGTTTGTGTGATCGCGGTGAGTTGGAGGAGATTTTGATTATATATAACTCGTTCTCCGGTGGGATTCCTGCGAGTTTGGGAGCGTGCCAGAGTTTGATGCGTGTTAGGCTTGGATATAATAAGTTTTCCGGCGAGGTTCCGGCGGGATTTTGGGCCTTGCCTCGTGTTTATCTGCTTGAACTTGTTGATAACGAGTTCAATGGTTCAATCGCGAGGACTATTGGTGGGGCGGTTAATCTATCGCTGTTGATTCTGTCGAAGAACAATTTCTCAGGATGGATTCCTGAGGAGATTGGGTGGTTGGAACATCTTGAGGAATTTTCTGGTGGTGATAACATGTTCAATGGTTCTTTGCCTGATAGTATTGTTAACCTTCGACAGCTCGGGACTCTTGATCTTCATAACAATAAGCTCTCAGGGGAGCTTCCTAAGGGAATTAAGTCATTGAAGAAACTCAATGAGTTGAATTTGGCTAATAATGACATTGGTGGGAATATCCCTAATGATTTCGGGAGTCTGCTTCAGCTTAATTTCCTCGATCTTTCGAATAACAAATTTTCAGGCAGAGTCCCTCTGGGGTTGCAGAGTTTGAAGCTCAATGAGCTTAATTTGTCTTATAATCAGCTTTCTGGTGAAATTCCCCCAATGTTGGCTAAGGATATGTATAAGGCTAGCTTTGTGGGTAATCCTGGTTTGTGTGGTGATTTGAAAGGCCTTTGTGATGGGAAAAATGAGGATAAGAAGGCTTCAGGTTTTGTTTGGTTGCTTAGATCTCTCTTCATTGTTGCCACATTAGTGTTTGTTGTTGGTGTGGTTTGGTTCTACTTCAAGTATAGGAATTTCAAGAATGGCAAAGGAGGTATTGATAAGTCTAAGTGGACTTTGATGTCATTTCATAAACTGGGTTTTGGTGAAGATGAGATTTTGAACTGTCTTGATGAAGATAATGTGATAGGAAGTGGATCATCCGGGAAGGTCTATAAAGTTGTACTTAGCAGTGGGGAGGCCGTGGCTGTGAAGAAGATTTGGGGAGGGGCTAAAACGGAAACCGGGAGTGGAGATGTCGAAAAGGGTAGGATTCAAGACAATGCTTTCGATGCGGAAGTTGAAACATTGGGCAAAATTAGGCACAAGAACATTGTCAAGCTATGGTGTTGCTGCACCACTAGGGACTGCAAGCTCTTGGTGTATGAGTACATGCCGAATGGCAGTCTCGGTGATTTGCTACATAGCAGTAAAGGAGGGTTGTTGGATTGGCCAACTAGGTTTAAGATAGCTGTTGATGCTGCTGAAGGTCTCTCTTATCTGCATCATGATTGTGTTCCACCGATTGTCCACAGAGATGTGAAATCTAACAACATCTTGTTGGATGGGGACTTCGGTGCAAGGGTGGCAGATTTTGGAGTCGCTAAGGTAGTCGAATCCAATGGAAAAGGAACTAAGTCCATGTCCATCATAGCTGGGTCTTGTGGATATATTGCACCAGAATATGCATACACACTTAGAGTGAATGAGAAGAGTGACATATATAGTTTTGGTGTTGTCATACTTGAGTTGGTTACTGGAAGAAAGCCTGTAGACCCTGAATTTGGGGAAAAGGACTTGGTTACATGGGCATGCAGCACCTTGGATCAAAAAGGTGTCGACCATGTTCTTGACTCAAGGCTTGATTCTTGTTTCAAAGAAGAAATTTGCAGGGTCCTCAACATTGGTCTCATGTGCACTAGTCCTCTTCCAATCAACAGGCCTGCAATGAGAAGAGTGGTCAAGATGCTGCAAGAAGTGGGCATAGAGAACCAAGCCAAGTCTTCCAAAAAAGATGGAAAATTGTCCCCTTATTACTATGATGATGGGTCAGATCATGGAAGTGTTGCTTAA 3000 0.4393 MHSFLFLFSLFLFTPTLTLSLNQEGLYLYQFKLTLSDPDSTLSTWSLHSSNPCNSNWFGITCDPTNSTITSLDLSSSNLRGQFQPSLLCRLPNLTSVTLFNNSIDQTLPSSISICQTLTRLDLSQNLITGSIPQTLSELPNLTYLDLTGNNFSGSIPFSFGMFQKLETLSLVYNLLEGSIPYSLGNVTTLRMLNLSFNPFSPARVPSSLGKLTNLEVLWLSQCNLVGPIPEEFGNLKSLVVLDLSMNGLDGKIPSSITGLTRLWQVELFNNSLSGELPVGMENLTALRLFDASMNRLSGRIPDELTRLPLESLNLYENSFEGELPESLADSPNLYELRLFGNRLSGKLPENLGKNAPLRLIDVSNNQFSGEIPASLCDRGELEEILIIYNSFSGGIPASLGACQSLMRVRLGYNKFSGEVPAGFWALPRVYLLELVDNEFNGSIARTIGGAVNLSLLILSKNNFSGWIPEEIGWLEHLEEFSGGDNMFNGSLPDSIVNLRQLGTLDLHNNKLSGELPKGIKSLKKLNELNLANNDIGGNIPNDFGSLLQLNFLDLSNNKFSGRVPLGLQSLKLNELNLSYNQLSGEIPPMLAKDMYKASFVGNPGLCGDLKGLCDGKNEDKKASGFVWLLRSLFIVATLVFVVGVVWFYFKYRNFKNGKGGIDKSKWTLMSFHKLGFGEDEILNCLDEDNVIGSGSSGKVYKVVLSSGEAVAVKKIWGGAKTETGSGDVEKGRIQDNAFDAEVETLGKIRHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSSKGGLLDWPTRFKIAVDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGDFGARVADFGVAKVVESNGKGTKSMSIIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRKPVDPEFGEKDLVTWACSTLDQKGVDHVLDSRLDSCFKEEICRVLNIGLMCTSPLPINRPAMRRVVKMLQEVGIENQAKSSKKDGKLSPYYYDDGSDHGSVA* 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0912 999 SUPERFAMILY Protein kinase-like (PK-like) 682 967 IPR011009 -
Lan19g0912 999 Pfam Protein kinase domain 688 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0912 999 ProSiteProfiles Protein kinase domain profile. 686 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0912 999 Gene3D Ribonuclease Inhibitor 383 614 IPR032675 -
Lan19g0912 999 Gene3D Ribonuclease Inhibitor 281 382 IPR032675 -
Lan19g0912 999 Gene3D Ribonuclease Inhibitor 21 179 IPR032675 -
Lan19g0912 999 Gene3D Ribonuclease Inhibitor 180 280 IPR032675 -
Lan19g0912 999 Pfam Leucine Rich repeat 570 586 IPR001611 GO:0005515
Lan19g0912 999 PANTHER LRR RECEPTOR-LIKE KINASE 7 981 - -
Lan19g0912 999 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 7 981 - -
Lan19g0912 999 Pfam Leucine rich repeat 92 152 IPR001611 GO:0005515
Lan19g0912 999 ProSitePatterns Serine/Threonine protein kinases active-site signature. 818 830 IPR008271 GO:0004672|GO:0006468
Lan19g0912 999 Gene3D Phosphorylase Kinase; domain 1 670 773 - -
Lan19g0912 999 SMART LRR_typ_2 236 260 IPR003591 -
Lan19g0912 999 SMART LRR_typ_2 499 522 IPR003591 -
Lan19g0912 999 SMART LRR_typ_2 212 235 IPR003591 -
Lan19g0912 999 SMART LRR_typ_2 91 115 IPR003591 -
Lan19g0912 999 SMART LRR_typ_2 139 165 IPR003591 -
Lan19g0912 999 SMART LRR_typ_2 523 546 IPR003591 -
Lan19g0912 999 SUPERFAMILY RNI-like 71 417 - -
Lan19g0912 999 ProSitePatterns Protein kinases ATP-binding region signature. 692 715 IPR017441 GO:0005524
Lan19g0912 999 Pfam Leucine rich repeat N-terminal domain 22 63 IPR013210 -
Lan19g0912 999 MobiDBLite consensus disorder prediction 977 999 - -
Lan19g0912 999 Gene3D Transferase(Phosphotransferase) domain 1 774 991 - -
Lan19g0912 999 SMART serkin_6 686 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0912 999 SUPERFAMILY RNI-like 348 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0912 Lan-Chr19 16518806 16522760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0912 15 999 Receptor kinase-like Gene Family AT1G28440 67.440 0.0 1377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan19g0912 Pkinase 4.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0912 - - gmx:100776936 1545.41