Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0911 ATGAGCCATGTTGAGTATATTGCTTATGTTTTGGTCATGGTCACTCTATCCATAATTCTCATAGTTCTTGGTGTTGTTCTCATACTTGTTTGCAAGAAGAAACCAGTTGAATCAAAAGAAATACTTCCTGTGAAGCTTTATGCGCATGCTCGCGCATACCCTTTAATTTCCATTGATGCTGCAACTGATGGCTTCAATCAAAGGAGAATTGTTGGCCAGGGTCGCTTAGGAACTGTTTATGCAGGGTCACTTGAGAAACAAGAACTTGTAGCTGTGAAGAGGATTCACCCTTATCATGTTTTGAGCAATGCAGGATTTGGATTCGGATTTGGATTCTCATCGGTGTTGAAATGGCTCTCTTTAGCCCAACACCCCAACATAGTTCCCATAATAGGATTCTCAGAAGCACCAGGTGAGAGAGTTATATTGATGGAGTTTGTTCACTTACAAAGCTTGAACTTTTATATGCAACATGGAGCTTCACGTTTGGATTGGAACAAGAGGTTAAAGATTGCTTCTGGAGCAGCTAGAGGGCTTCAATATTTACATGAAGTAGTGGCACCAAGTATTGTACATGGGTGTGTTAAGTCCTCTAATATTCTCATTGATGTTAACTTTTGTGCTAGGGTTTCTGACTATGGCCTTAACTTTTTGGCACCTATGGAAAAGAGAGGGCTAGTAGGTTATGTAGATGATGAGTATTGGAATATAAGAGGGGTTGGTGGTGGTGGTGCTACTAAGGAGAGTGATGTTTATGGATTTGGGGTGGTAATTTTGGAGCTTTTAAGTGGAAGAGAATGTGAAGGAGGGTTATTGGTGGAATGGGCATTGCCTTTGATTAAGGAAATGAGTTTTAGTGAACTTTTGGATCCAAGGTTGGTGATTCCTTCTGATCTTAGGCCTTTGGTTAGATTAGCCAAAGTTGCATCAGTTTGTGTTGGTAATTCAAGGAAGTGTAGGCCTAGCATGGCTCAAGTAGCAACCATTTTGAACAACTTGGAGACCCAAGTGTGCCTCTAA 1020 0.4098 MSHVEYIAYVLVMVTLSIILIVLGVVLILVCKKKPVESKEILPVKLYAHARAYPLISIDAATDGFNQRRIVGQGRLGTVYAGSLEKQELVAVKRIHPYHVLSNAGFGFGFGFSSVLKWLSLAQHPNIVPIIGFSEAPGERVILMEFVHLQSLNFYMQHGASRLDWNKRLKIASGAARGLQYLHEVVAPSIVHGCVKSSNILIDVNFCARVSDYGLNFLAPMEKRGLVGYVDDEYWNIRGVGGGGATKESDVYGFGVVILELLSGRECEGGLLVEWALPLIKEMSFSELLDPRLVIPSDLRPLVRLAKVASVCVGNSRKCRPSMAQVATILNNLETQVCL* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0911 339 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 1 338 - -
Lan19g0911 339 Gene3D Transferase(Phosphotransferase) domain 1 149 338 - -
Lan19g0911 339 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 338 - -
Lan19g0911 339 Pfam Protein tyrosine and serine/threonine kinase 68 328 IPR001245 GO:0004672|GO:0006468
Lan19g0911 339 Gene3D Phosphorylase Kinase; domain 1 30 146 - -
Lan19g0911 339 ProSiteProfiles Protein kinase domain profile. 65 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0911 339 SUPERFAMILY Protein kinase-like (PK-like) 47 330 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0911 Lan-Chr19 16511647 16512762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0911 50 337 Receptor kinase-like Gene Family AT3G59420 39.216 1.03e-55 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lan19g0911 PK_Tyr_Ser-Thr 1.7e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0911 - - vun:114187437 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g0740 6 6717108 6718335 Lan19g0911 19 16511647 16512762 PCT
Lan19g0911 19 16511647 16512762 Lan6g0740 6 6717108 6718335 PCT