Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0910 ATGACATGGTGCAATGATTCTGATGAGGAGAGGGGCATTGAAATTGAATCAATCACGCCTACTATTACTCCTAGAGCTAATAACAACAACACTAGAGCAATAAAACTTACCAAAGATATTCGAACCATAACTTGCCCCTCATGCGGCCATAACATTCAATTCCAAGATCAGGGTGGAATTAATGAGTTACCGGGGTTACCAGCTGGAGTAAAGTTTGATCCAAGTGACCAAGAGATTCTAGAGCATTTGGAGGCAAAAGTGGTTTCTGATGTACACAAGCTTCATCCTCTTATTGATGAGTTCATACCAACGCTTGAAGGGGAAAATGGGATTTGTTATACACACCCAGAAAAGCTACCAGGAGTAAGCAAAGATGGACAGATCCGCCACTTTTTTCATAGGCCTTCAAAAGCATACACAACAGGAACAAGGAAAAGAAGAAAGGTTCATACTGATGAAGAAGGAAGTGAGACAAGATGGCACAAAACAGGAAAAACTAGACCAGTTTTTGGTGTTGGTCCAGTGAAAGGTTTTAAAAAGATACTAGTACTATACACCAACTATGGCAGACAAAAGAAGCCTGAAAAGACTAACTGGGTTATGCATCAATATCATCTTGGTAGTAATGAAGAAGAGAAAGATGGAGAATTAGTGGTCTCAAAAGTCTTCTACCAAACACAACCTAGACAATGTGGTAATAATAACACCTTTATGAAGGACCCATATGAAAATAAACATACTAACCAAATTGGCTATGATGATAGTACAATATTACCTAGAAATGCATCTCCTTTGAACTACTATGATGTTCCTTACATAAATTATGATCATGTTGTTCACGATAGGGAAAGCTCACCTCAACTTATTCCAAACATGGTTACTCATCAAGGTGATGGATCTTCCTTTATTCGCTTAGCAATGGATCATGCAAACAAAGCAAGACTTGAGAGAAAGTAA 957 0.3835 MTWCNDSDEERGIEIESITPTITPRANNNNTRAIKLTKDIRTITCPSCGHNIQFQDQGGINELPGLPAGVKFDPSDQEILEHLEAKVVSDVHKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRPVFGVGPVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSNEEEKDGELVVSKVFYQTQPRQCGNNNTFMKDPYENKHTNQIGYDDSTILPRNASPLNYYDVPYINYDHVVHDRESSPQLIPNMVTHQGDGSSFIRLAMDHANKARLERK* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0910 318 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 298 IPR044799 GO:0003700
Lan19g0910 318 MobiDBLite consensus disorder prediction 145 164 - -
Lan19g0910 318 Pfam No apical meristem (NAM) protein 67 206 IPR003441 GO:0003677|GO:0006355
Lan19g0910 318 ProSiteProfiles NAC domain profile. 66 225 IPR003441 GO:0003677|GO:0006355
Lan19g0910 318 MobiDBLite consensus disorder prediction 140 165 - -
Lan19g0910 318 Gene3D NAC domain 75 229 IPR036093 GO:0003677|GO:0006355
Lan19g0910 318 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 1 298 - -
Lan19g0910 318 SUPERFAMILY NAC domain 62 225 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0910 Lan-Chr19 16501139 16504824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0910 1 314 NAC Transcription Factor Family AT1G28470 57.879 5.75e-122 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan19g0910 NAM 3.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0910 - - gmx:100783888 477.248