Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0900 ATGGACCAACAAGATAATGTGTTTCTGATTCTTATTTTCCAAGTTATGCTTGTAGCAGCACAGACATCAAATGAAGATTATTCTGGGCTACAATTTCTAACACAGTCATGGACTAACAAACCACCAAATTGGGTGGGTTCAAATCCTTGTGGTAGTAATTGGGATGGAATTCATTGCACCAATTTAAGAATTACTCAATTGAAACTAGCAAGCTTAAATTTGATGGGTCATCTTTCTTCAGCAATCCAATCATTATCTCAACTAGATACAGTGGATCTTTCTTACAACACAGGCTTGACAGGAACAATTCCAAAAGAAATAGGAAACTTGAAAAATCTAAAATCCCTTGCACTGGTTGGTTGTGGTTTCTTTGGTCCTATTCCAGACTCAATTGGATTTCTAAAGCAGCTGACCTTTTTAGCACTGAATTCTAATCGGTTCAATGGAAGTGTTCCGAGCAGCATCGGCAACCTATCCAATATTAACTGGCTAGATCTTTCTGATAATGAGCTTGAAGGACCTATTCCTGTCTCTGATGATCAAGGACAACCAGGTCTTGACCTGCTACTTAAGGCCCAACACTTTCATTTGGGGGACAATAAGCTCTCTGGTCAAATACCGCCAAAACTTTTCAACTCGAGTATGATTCTAGAACACGTGCTTTTCAGCCATAATCAACTAGCTGGTACTATTCCGCGCACCCTCAGTCTTGTGACCACAGTGGAGATTGTGCGCTTTGATAGGAACGGATTAACCGGGGGATTGCCTTCAAACTTCAACAATCTAGAAAAGCTTAGTGAGCTGTATTTATCTGACAACAAGTTCAATGGCTCTCTGCCGGATCTAACTGCAATGAATAGTCTCACCTATGTGGATATGAGCAACAATAGTTTCACTTCTTCCGATAATATTCCTTCATGGGTTACAAGTTTGGAATACCTGACCACTGTGATATTGGGGGACAACCAGCTCAGTGGCACATTTAATATCAGCAATGGCTACAGCAACAGTTTGCAACTCATTAATTTGCAGAATAATGCCATAACCGATTACAAGCCGGGAAACCAAAAAATAAATTTTGATGTAATACTTACTGGCAATCCAATTTGTCTTGAAAATGGAGTTTCTCAACAGAGTTACTGCCAAGTGCCTGAAGTCATTTCCTCATATTCGACACCACCGAATAATTGTTCACCTCAAACATGCAGTAATAGTCAGATTTCCAGCCCAAACTGTAGGTGTGCTTATCCCTATACAGGAAGTCTGGTTTCTAGAGCTCTTAGCATCTCAAACTTTAACACAAGTGACTATAAAGATATTGAGAAGTCTCTGATGGATAGTTTTCGAGCCCAAAATCTTCCCGTGGATTCAGTTTCTCTCAGTGATCCAATGAAGAACTCATCCAATGATAACTTTCAGTTTACTCTGTGTATATTCCCATCCCAAACTGATCGTTTCAATAGAACTGGAGTTTCACAAATTGCTTTTGTTCTAAGCAACCAAATATACGAATCCCCAGAGTTCTTCTATCCTTACTTCTTCATTGGTGCCAACTATAGATACTATGAAGGAGAACCTAAAAATTCAAGCTCAGGACACATTGGGATTATAGTTGGTGCAGTACTTGCTGTTGTGGCCTTACTTGTGCTAGCAGTCCTTGCAGGGATGTATACCATCCACCAAAAAAGAAGAGCGCAAAGAAGTAAAGAGCAGAACCCTTTTGTTAATTGGGAACAGAACAATAATAGTGGCATTGCTCCTCAGTTGAAAGGAGCAAGATGGTTTTCTTTTGATGAGTTAAGGAGATACACCAACAACTTCGCCGAAGCCAATACGATTGGATCTGGTGGATATGGACAGGTTTACCAAGGTGTTCTTCCCTCTGGGGAATTGGTTGCAATCAAACATGCTGCAAAAGAATCCATGCAGGGCGCTGTTGAGTTTAAAACTGAGATTGAACTTCTATCAAGGGTGCATCATATGAATGTTGTTAGTCTTGTTGGTTTCTGTTTTGAGAATGGCGAACAAATGCTGGTGTATGAGTACATTCCAAATGGATCTTTAATGGATAGTCTTTCAGGAAAGTCTGGGATATGGATGGACTGGATAAGGAGACTGAAAGTAACATTGGGTGCAGCCAAGGGTCTGTCCTATCTTCATGAACTTGCTAACCCACCAATCATACATAGGGACATAAAATCAGGCAATATCCTACTTGATAGTCACCTCAATGCAAAAGTTGCTGATTTTGGTCTCTCCAAACTTCTTGTTGATAGTGATAGGGGCCATGTCACTACTCAAGTCAAAGGAACAATGGGGTACTTGGATCCTGAATATTACATGACCCAATTGCTGACCGAAAAAAGCGATGTATACAGCTTCGGAGTATTGATGCTGGAACTAGTAACAGGAAGAAGACCAATAGAGCAAGGAAAGTACATTGTAAGAGAGGTAATGAAGATAATTGATACATCAAAAGATTTATACAACCTTCATTCCATTCTAGACCCAACCATAACAAAATCCACAAAGCCAAAAGGTATAGAAAAGTTTGTGGAACTGGCATTAAGGTGTGTCAAAGAATATGCACATGAAAGGCCTTCAATGTCTGATGTTGTAAAAGAAGTTGAGAACATAATAGAAATTGTTGGTATTAATCATAATTCTGAATCAGCTACAACATCAGAAGTTTATGATGTAGAGAAAGGGGGTGATGTTATACAACCTTATGGCAATAAAGATTTTAACTATAGTGGAACTTTTCTATCAGCAAAGGTAGAACCTCAATAG 2790 0.3946 MDQQDNVFLILIFQVMLVAAQTSNEDYSGLQFLTQSWTNKPPNWVGSNPCGSNWDGIHCTNLRITQLKLASLNLMGHLSSAIQSLSQLDTVDLSYNTGLTGTIPKEIGNLKNLKSLALVGCGFFGPIPDSIGFLKQLTFLALNSNRFNGSVPSSIGNLSNINWLDLSDNELEGPIPVSDDQGQPGLDLLLKAQHFHLGDNKLSGQIPPKLFNSSMILEHVLFSHNQLAGTIPRTLSLVTTVEIVRFDRNGLTGGLPSNFNNLEKLSELYLSDNKFNGSLPDLTAMNSLTYVDMSNNSFTSSDNIPSWVTSLEYLTTVILGDNQLSGTFNISNGYSNSLQLINLQNNAITDYKPGNQKINFDVILTGNPICLENGVSQQSYCQVPEVISSYSTPPNNCSPQTCSNSQISSPNCRCAYPYTGSLVSRALSISNFNTSDYKDIEKSLMDSFRAQNLPVDSVSLSDPMKNSSNDNFQFTLCIFPSQTDRFNRTGVSQIAFVLSNQIYESPEFFYPYFFIGANYRYYEGEPKNSSSGHIGIIVGAVLAVVALLVLAVLAGMYTIHQKRRAQRSKEQNPFVNWEQNNNSGIAPQLKGARWFSFDELRRYTNNFAEANTIGSGGYGQVYQGVLPSGELVAIKHAAKESMQGAVEFKTEIELLSRVHHMNVVSLVGFCFENGEQMLVYEYIPNGSLMDSLSGKSGIWMDWIRRLKVTLGAAKGLSYLHELANPPIIHRDIKSGNILLDSHLNAKVADFGLSKLLVDSDRGHVTTQVKGTMGYLDPEYYMTQLLTEKSDVYSFGVLMLELVTGRRPIEQGKYIVREVMKIIDTSKDLYNLHSILDPTITKSTKPKGIEKFVELALRCVKEYAHERPSMSDVVKEVENIIEIVGINHNSESATTSEVYDVEKGGDVIQPYGNKDFNYSGTFLSAKVEPQ* 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0900 929 ProSiteProfiles Protein kinase domain profile. 607 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0900 929 ProSitePatterns Serine/Threonine protein kinases active-site signature. 727 739 IPR008271 GO:0004672|GO:0006468
Lan19g0900 929 Gene3D Ribonuclease Inhibitor 15 182 IPR032675 -
Lan19g0900 929 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 2 903 - -
Lan19g0900 929 PANTHER RECEPTOR-LIKE PROTEIN 55 2 903 - -
Lan19g0900 929 SUPERFAMILY Protein kinase-like (PK-like) 584 875 IPR011009 -
Lan19g0900 929 Gene3D Transferase(Phosphotransferase) domain 1 683 902 - -
Lan19g0900 929 ProSitePatterns Protein kinases ATP-binding region signature. 613 635 IPR017441 GO:0005524
Lan19g0900 929 Gene3D Ribonuclease Inhibitor 183 368 IPR032675 -
Lan19g0900 929 SMART serkin_6 607 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0900 929 Gene3D Phosphorylase Kinase; domain 1 577 682 - -
Lan19g0900 929 SUPERFAMILY L domain-like 31 357 - -
Lan19g0900 929 Pfam Protein kinase domain 609 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0900 929 CDD STKc_IRAK 613 879 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0900 Lan-Chr19 16406316 16412974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0900 7 929 Receptor kinase-like Gene Family AT5G49760 51.471 0.0 913
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lan19g0900 Pkinase 5.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0900 - - gmx:100786172 1317.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0664 4 9197860 9204284 Lan19g0900 19 16406316 16412974 LSH
Lan19g0900 19 16406316 16412974 Lan16g0164 16 1268118 1274193 LSH