Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0892 ATGGCAAAGGTGAATATTTCAGAACGAATTGTAATATTACCTTCTCACCCTCCTTTCCTTAACGACCATACTCTCTCTCTTTCTCACCTTGACACCGACACCAATCTCCACCTCACCTTCCGTTACCTGCGCGTGTACTCCACCTCCCACCATGACCCTTTTCCTCTCATCTCTTCCTCCCTCTCCCATTCTCTCAACCACTACTACCCTCTCACCGCTACCCTCCGCCGCAGTCACCACCAACCCCACCGCCTCGAACTCCACTGCACCGCCGGTAAAGGAGTCCCCTTCATTCGCGCCACCGTTGAGTGCACCCTACCTTCACTGAATTATCTCGATGACACGGATTTTAGTTTCGTTGAACAGTTGGTGCCTGATCCTGGACCCGAAGAGGGGATGGAGCATCCTTGCATGCTTCAACTCACGGTGTTCAAGTGTGGTGGTTTTGCTCTTGGTGCTGCCATGCACCACTCCTTGTGTGATGGGTTGGGAGGGAGTTTGTTTTTTAATGCGGTGGCTGAGCTAGCTCGTGGCTCCACCCGGATAACGGTTGAGCCGGTTTGGAACCGGGACAAGTTTTTGGGTCCGAGAGAACCGGTTCGAGTGGATTCGCCACTGATAAGGGAGTTTTTGTATCTGGATAAAGGGTTCTTGGCGTATGAGCAGGATATTGGTAATGTTGTGAGAGAGTGCTTTCATGTGAAGGATGAGTGCTTGGAGAGGTTTAAGAAGTCTTTGTTTGACCAATGTGGGTTGAACTTCACCACTTTTGAGTTTCTTGGTGCTTACATTTGGAGATCCAAGGTCAAGGCCTTTGGAGTCAAGGCTCATGAGAAGGTTAAGTTTGCATACTCGGTTAACATAAGGAGACTAGTAAAACCACCCCTATCTACTGGCTATTGGGGCAATGGTTGCGTTCCAATGTATGTGCAACTGAGTGCTAAAGATTTGATAGAGGAACCAATTTGGAAAACTGCAGAGCTAATCAAGAAGAGTAAAAGAAATGTTACAGATGAGTATGTTTCCTCATTCATCAATTACCAGGAGCTGCATTTTGCAGATCGAATAACAGCAGGAAAAGGTGTAAGTGGGTTCACAGATTGGAGACACTTGGGGCATTCAACTGTGGATTTTGGATGGGGAGGTCCAGTTACTGTTTTGCCACTTGGAAGGAACCTACTTGGAAGTGTTGAGCCTTGCTTCTTCTTGCCTTATTCAACAGCGACCGAAGGGAAGAAGGACGGTTTCAAGGTTTTGGTGACTTTGGCAGAGGCTTCTTTGCCTGCTTTCAGAGAAGATATGCAGGTTTTTACCAGCAGCCAAAAGCAGCTTGCAAATAATAAATTTTAG 1350 0.4741 MAKVNISERIVILPSHPPFLNDHTLSLSHLDTDTNLHLTFRYLRVYSTSHHDPFPLISSSLSHSLNHYYPLTATLRRSHHQPHRLELHCTAGKGVPFIRATVECTLPSLNYLDDTDFSFVEQLVPDPGPEEGMEHPCMLQLTVFKCGGFALGAAMHHSLCDGLGGSLFFNAVAELARGSTRITVEPVWNRDKFLGPREPVRVDSPLIREFLYLDKGFLAYEQDIGNVVRECFHVKDECLERFKKSLFDQCGLNFTTFEFLGAYIWRSKVKAFGVKAHEKVKFAYSVNIRRLVKPPLSTGYWGNGCVPMYVQLSAKDLIEEPIWKTAELIKKSKRNVTDEYVSSFINYQELHFADRITAGKGVSGFTDWRHLGHSTVDFGWGGPVTVLPLGRNLLGSVEPCFFLPYSTATEGKKDGFKVLVTLAEASLPAFREDMQVFTSSQKQLANNKF* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0892 449 PANTHER N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE, PUTATIVE-RELATED 3 439 - -
Lan19g0892 449 Gene3D - 220 433 IPR023213 -
Lan19g0892 449 PANTHER ACYL TRANSFERASE 4 3 439 - -
Lan19g0892 449 Pfam Transferase family 2 435 - -
Lan19g0892 449 Gene3D - 1 208 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0892 Lan-Chr19 16351780 16353872 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0892 3 390 Monolignol Biosynthesis Gene Families AT5G48930 26.521 9.78e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0892 - - gmx:100817021 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0892 19 16351780 16353872 Lan16g1153 16 18717081 18720909 LSH