Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0880 ATGCCTACTCCTTCATTTTCATCTTCATCTTCCTCTTCTTCTATTTGGGTATTGTCAAACATAAAGCTTCAATTCTTTGCCCGTATCAGAAGGTTTCTTCACTCCAAAACAACCCGAAAGCGCGGCTGCGACCCCTCTGATCAATTCTCTAAAGAAAACATCATAGTGGATCACCAAAACAAGGTTGAAAACATTGAAGAAGTTCATGTTATGGAGGAGGAGAAATCTGAAATGATATTGCAAAGGAGTGTGAAGAAGCTTCACTTTGGAAGCTGGGAAGAGAAGGAGGTAGCAGCAAAGGAGATTGAAAAGTTAGCTAAAGAAGATGTGAAGGTTAGAAAGTTGATAACAGGACTTGGGGTGGTGCCGGTGTTGGTGTCTATGGTGGCGTCTCAGGTGGCTAGCCGCCGGAGATCAGGGTTGACGGCGTTGATCCACCTAGCTGATGGAACCTACACGAACAAGGCTTTGATGGTTGAAGCAGGAATATTATCCAACCTACCAAAGAAAATTGACCTTTTAGATGAATCAACAATAAGTGCATTTTCAGAGTTACTCTTATCATTATCATATCTATCAAACACCCAATTCTCTTTTCCTTCATTAGATTTTCTCCCATTACTTAGACACATTCTTGAGTCAAGGTCAAGTTTTGATACCAAAGGATCATGTTTGTGTGCCTTATACAACATCTCAACTGTGTTAGAGAATGCAAAACTTTTAGTCTCTAGTGGGTTTGTGCCTATGCTCTTGGAAATGTCCACAATGAAGGAAATTTCAGAGAAAGCACTTGCCACTATTGGGAACATGTTGGTGACATTGATGGGAAGGAAAGCAATAGAGAATAGCTCAATGGTGCCAGAAAGTTTTATTAAGATCTTGTCATGGGAAGATAAACCAAAATGCCAAGAGTTATCAGTTCATATTTTGATGATTCTGGCTCACCAAAGCTCATCACAAAGAGAGAAAATGGCACAGGCTGGGATTGTTCTTGCACTTCTTGAAGTGGTTCTATTGGGTAGTTCTTTGGGTCAGAAGAGAGCAATGAAATTATTGCAATGGTTTAAGGATGAAAGGAGAGTAAAAATGGGGCCACATTCAGGTCCACAAACACCAAGATTTACAATGGGATCACCTGTAAATGAAAGAGATGGAAAAGAAGGGAAGAAAATGATGAAAAGTTTGATGAAACAAAGCTTGGTTAGGAATATGGAAATAATAATGCAGAGGGCAAATGTAACTGGAGCCTCTTCTAAACTGAAGTCACTGGTGATCAGCACAAGTTCCAAGAGTTTGACTTACTAA 1305 0.4 MPTPSFSSSSSSSSIWVLSNIKLQFFARIRRFLHSKTTRKRGCDPSDQFSKENIIVDHQNKVENIEEVHVMEEEKSEMILQRSVKKLHFGSWEEKEVAAKEIEKLAKEDVKVRKLITGLGVVPVLVSMVASQVASRRRSGLTALIHLADGTYTNKALMVEAGILSNLPKKIDLLDESTISAFSELLLSLSYLSNTQFSFPSLDFLPLLRHILESRSSFDTKGSCLCALYNISTVLENAKLLVSSGFVPMLLEMSTMKEISEKALATIGNMLVTLMGRKAIENSSMVPESFIKILSWEDKPKCQELSVHILMILAHQSSSQREKMAQAGIVLALLEVVLLGSSLGQKRAMKLLQWFKDERRVKMGPHSGPQTPRFTMGSPVNERDGKEGKKMMKSLMKQSLVRNMEIIMQRANVTGASSKLKSLVISTSSKSLTY* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0880 434 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 72 434 - -
Lan19g0880 434 MobiDBLite consensus disorder prediction 362 386 - -
Lan19g0880 434 Gene3D - 61 370 IPR011989 -
Lan19g0880 434 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 72 434 - -
Lan19g0880 434 SUPERFAMILY ARM repeat 85 352 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0880 Lan-Chr19 16275050 16277659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0880 93 372 U-box Gene Family AT1G67530 30.314 7.77e-19 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0880 - - gmx:100819002 607.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0652 4 9102413 9106080 Lan19g0880 19 16275050 16277659 LSH
Lan1g1010 1 20507912 20509386 Lan19g0880 19 16275050 16277659 PCT
Lan19g0880 19 16275050 16277659 Lan1g1010 1 20507912 20509386 PCT