Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0876 ATGCCACCATCTTCTTCATGTTCATTACCTTCACTTTCTCAACAACATTGTTACCCTCTTTTCCACAACCACCCTTTACATTTTTCTCTGCCTTTCTCCACAAACACTTCACATTTAGTCTCATTTTCAGCCTCAAAGGAAGCTCCTTTAAATGCTTCAGAAAAACCAGAACTTCTCAACTTATTTAGAAACTGGGGTTTCTCAAATTCTCATTTGTATACCATGCTTTCAAGGGAACCATGGTTACTTTCATGCAACCCCAACAAAAGGGTTTTGCCAAAGTTTGAATTTTTACTCTCAAAAGGTGCTTCTACCTCTGACATTGTCTCCATTGTGACCAAGACACCCAGGTTTCTAAGTCCTAGTTTGGAGAATCATATAATCCCAACATATGAATTGGTACATAGTTTTTTGTTATCTGATGAGGAAACTGTAGCTTGTATAATACGTAACACACTTTCCTTTTGTTCTAGTAGAATGTCACATAATATCAAATTGTTGATTGGTTGTGGAGTTTCTGAGTCAAACATTGCCATATTGCTTAGAAAATGGCCTAGTATACTTTGTTCAATTGATTTGCTTAAGGAGGTTGAGGAAGTTAAGAGATTGGGATTTAATCCTTCAAAAACAACTTTTAGTATTGCATTGCTTGCAAAACATACTGTGTGCAAATCCAAATGGGATGAGAAGATTGGTGTTTTTAAGAAATGGGGTTGGGATGATGAAACCATTCTTGAAGCATTTAGGAGACAACCTAATTGCATGTTAGTATCTTGTGATAAGATTAATGTAGTGATGAATTTTTGGGTCAAAGAGTTGGGTTGGGATGTTTTAGCCCTTGTTAGAGGACCAGATATCTTTGGATTTAGTTTGGAGAAAAAGATCATTCCAAGGGCTTATGTACTCAAGTATTTGTTGGGAAAAGGTTTGATGAAAAAAGATGCTAGCTTGATTACACCATTTAGAATCTCTGAGATTTTGTTCCTGCAAAAGTTTGTGGAGTGTTTTGAGGAGGAGGAAACTTCTCAACTTTTAAATATATATTGGGAAAAATTGAATGTTCAAGATAACAGGGAAAAGGTTCCATTCAGCAAGTTACAAATGATCAACTTATGA 1116 0.3575 MPPSSSCSLPSLSQQHCYPLFHNHPLHFSLPFSTNTSHLVSFSASKEAPLNASEKPELLNLFRNWGFSNSHLYTMLSREPWLLSCNPNKRVLPKFEFLLSKGASTSDIVSIVTKTPRFLSPSLENHIIPTYELVHSFLLSDEETVACIIRNTLSFCSSRMSHNIKLLIGCGVSESNIAILLRKWPSILCSIDLLKEVEEVKRLGFNPSKTTFSIALLAKHTVCKSKWDEKIGVFKKWGWDDETILEAFRRQPNCMLVSCDKINVVMNFWVKELGWDVLALVRGPDIFGFSLEKKIIPRAYVLKYLLGKGLMKKDASLITPFRISEILFLQKFVECFEEEETSQLLNIYWEKLNVQDNREKVPFSKLQMINL* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0876 371 PANTHER CGI-12 PROTEIN-RELATED 43 357 IPR003690 GO:0003690|GO:0006355
Lan19g0876 371 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 43 357 - -
Lan19g0876 371 Gene3D Transcription termination factor 3, mitochondrial 122 340 IPR038538 -
Lan19g0876 371 SMART mt_12 109 140 IPR003690 GO:0003690|GO:0006355
Lan19g0876 371 SMART mt_12 145 173 IPR003690 GO:0003690|GO:0006355
Lan19g0876 371 SMART mt_12 73 104 IPR003690 GO:0003690|GO:0006355
Lan19g0876 371 SMART mt_12 178 206 IPR003690 GO:0003690|GO:0006355
Lan19g0876 371 SMART mt_12 245 276 IPR003690 GO:0003690|GO:0006355
Lan19g0876 371 SMART mt_12 277 311 IPR003690 GO:0003690|GO:0006355
Lan19g0876 371 Pfam mTERF 159 328 IPR003690 GO:0003690|GO:0006355
Lan19g0876 371 Pfam mTERF 59 205 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0876 Lan-Chr19 16241241 16242590 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lan19g0876 mTERF 2.4e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0876 K15032 - gmx:102663414 328.176