Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0875 ATGGGAACAATGGGACAAGAATCAGATTATAAAACCAAGTTGGTATTGGATATTTGTTCCATATCAACCCGTTCAGTTGCATGTGTTCATAGACTTGTCTCAAACCAAGATAAAGTATCTTTTATTGATTGGTATTGCATTCTTGGGGTAGAAGAAAATGCTGGAATAAATACTATTCACAAGCAATACCATAAACTTGCCTTGCTACTTCACCCAGATAAAAATAAACACCCAAAAGCTGAAATTGCTTTCAAGCTTGTCTCTGAGGCAAATACATGTTTATCTGATGCTGCAAAAAGAAAAGCTTTTAACTTAAAGAGGTATCAAAACTTCTGCTATGAGTGCAATAAAATCCCCAGCACTTCTTGCAATGGTTCAAGTTTCAAGGCATGGAACAATATCAGCAGTGCCAAATCTAGTAAACTTTGGAAAAATGTTAGAGACATGAGAGAAAAGTTGAAGGAGGAGGCTAAGGTGATAGAGAAATGTTTGCAGGCAAATTCAATGTCCAAGAATGAATCTCCACTCTACAATCCAACTGATTCTATAAACAAAAAGAGGTTTCATCATAGATTTGAGAAAGAAATCCCTCAGTTCAATCCATCTAACTACTCTTACCAAGGGTACCCTCATTCTAGGAGCAATGGTTACAAGAATTCTGAGACATGTTGGTACTTGCAGTCAGAAAAGATAGTGCACAATGAAAAAGGAAGAGATAAGTATTCTTCCCCAATTTTTGAAGTCAAATCATCACAAAGGAGAATTTTCACAAGCCAATTTGCTTATTTCCCATCAAGATGTTAG 804 0.3607 MGTMGQESDYKTKLVLDICSISTRSVACVHRLVSNQDKVSFIDWYCILGVEENAGINTIHKQYHKLALLLHPDKNKHPKAEIAFKLVSEANTCLSDAAKRKAFNLKRYQNFCYECNKIPSTSCNGSSFKAWNNISSAKSSKLWKNVRDMREKLKEEAKVIEKCLQANSMSKNESPLYNPTDSINKKRFHHRFEKEIPQFNPSNYSYQGYPHSRSNGYKNSETCWYLQSEKIVHNEKGRDKYSSPIFEVKSSQRRIFTSQFAYFPSRC* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0875 267 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 6 256 - -
Lan19g0875 267 SUPERFAMILY Chaperone J-domain 36 108 IPR036869 -
Lan19g0875 267 Gene3D DnaJ domain 42 162 IPR036869 -
Lan19g0875 267 PANTHER BNAC03G44070D PROTEIN 6 256 - -
Lan19g0875 267 Pfam DnaJ domain 43 104 IPR001623 -
Lan19g0875 267 PRINTS DnaJ domain signature 45 63 IPR001623 -
Lan19g0875 267 PRINTS DnaJ domain signature 63 78 IPR001623 -
Lan19g0875 267 PRINTS DnaJ domain signature 79 99 IPR001623 -
Lan19g0875 267 CDD DnaJ 43 96 IPR001623 -
Lan19g0875 267 SMART dnaj_3 42 99 IPR001623 -
Lan19g0875 267 ProSiteProfiles dnaJ domain profile. 43 107 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0875 Lan-Chr19 16236812 16238528 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0875 43 104 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 45.455 1.63e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0875 - - gmx:100778573 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0878 12 15842879 15844200 Lan19g0875 19 16236812 16238528 PCT
Lan19g0875 19 16236812 16238528 Lan12g0878 12 15842879 15844200 PCT