Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0863 ATGGGAGTTGAAAAAGAAGGGACAAAAAGTGGAGGAGGATATGTTGGTGGTTTTTTCCAGTTGTTTGATTGGACCTCGAAATCCCGCAAGAAATTATTTGCCAACAAGTCTGAGTTACCAGAGCCCTTGAAGCATGGAAGAAAAGCTAATTACAAAAAGACAATGACACAGCCCTATCTGGCGAACGAAGATGAGAGTGAAGTCTTGGCAAGTGTTAGAAGAAGTTGTGATCATAGTTATGCCTCATCTGTAACAGATGATGAATCATGTGGAACAAGGGCCCCTAATGTAGTTGCAAAGCTAATGGGATTAGATTCTTTGCCTCCTTCACATTTTTCTGATCCATATTCTTCTCCGTATTTCGATACCCTATCCCTCCAAGAGAGTCAGTACTTCAGCAGAAACCTCAATGATGAGCATGACCATCAGACCCTATATTCCGGAAAGCTGATTGAAAAGGCTGAGGGCTCTTCGAGGAACTATGTGGAGCCAAAGCCTCAAAAGACCGTTACTAGGCCAATTGAAAAGTTCCAAACAGAAGTATTACCTCCAAAATCAGCTAAGTCAATTCCCGTTACTCACCATAAACTTTTGTCCCCAATCAAGTGTCCTGGCTTTGTTCCAACCAATAATGCTGCTTATATAATGGAGGCTGCGGCAAGAATTATTGAACCTGGATCCCAATTTACTACAAAGGCTAAAACACATCTTGTATCATCCTCAGCAGTATCTTTGAGGGTTAAGGATCTCAAAGATAAGGTGGAGGCATCACAAAAAGGATCTCTAATTGGGCCATCCCTGTCTAGAGCTCGAGATCTAAAGGGAAAAAGAGAAATTTCTCATAGAACAACCCGGATTTCAGAACCTTCTGAAAGGTCACTTGAGTTAAATGCTGCCAAGTATCTAAAGGGACAACCTTTGAACAAAAGCTGGAATGGATCCGTGGATACATCATCCATCAGGTCTCCTACATATGCAGAAGAAGATTCTTCTTTAAAGAATAAGGGTAGGTCTATTTCCCTTGCAGTCCAAGCAAAAGTGAACGTTCAAAGACGAGAAGGATTGAGTTCAAGTGGTGGCAGAAGTATGGTGGGCCAGAAAGAGCATCTTGACACTAAACCTAACCAGAAATCAAAGGCAAATGTTCAGAAAATCTTGCATAAAAAATCTTCTGGTGCACTCAGGCAGAATAATCTGAAACAGAATGGTTTAGTTGAAAAAGACAAACTACCATCAAAGCCATCAGTATCCAATTCACACAGTAGAAAAGTTCTGTCTTCAGATTCCCCTTATTCACGCCATAGAAGCTCTAGTAGTAAATCCATTGCGAAAGTTGGATCCAGAAAGTCAGCAACGGAGGTGACCGATAGTGAAAAGGAAGTTTTATATACCAGTACTAACAATTTCCCTAGAAAGAAAAGGACTACAGACAAGGACTGGAATGATAGGGTTGTCGATAATTTGTTCATTGACAAAACTCCAAAGCCTGTTCAGCCTAAGCTAGTAAGTAATAAGCAATATAATTGGGCTGAAGAAACTACAAATAAAGATACAGATGTTGTCTCCTTCACATTTACCACACCATTATCACGGAAGAATCCTGGTCTTGAGACTTCTGGACAAGCTCGCCAGAAGACAATTGGTCTTTCATTGGATCAACGCATTAAAAGAGTGTCGCTAGACACGGACAATACAAGGTCTCCAATAGGATATAATGTGATCGGCGGCGATGCCTTGGGTATGCTTTTGGAACAGAAGTTGAGGGAATTAACTAATGCAGTTGAGACCTCTTGTCATGATGTTTCTAGAGTGAGACAACCTTCCAAAGCTGCACCTAAATCAAATAATACAGTTACCAAACTGAATTTAGTTAACTTGAATGCAAGGTTGCAACAGAAGAAAGACCAAGATGTGTTATTTACAGACAATATAAGCAGTAGCCAGGATTCTGGCATCTCTTTCACGGGTCTTCCTGAAATTTCATCGAAACATAACTCATGGGTTGATGAAATGGATCCACTGTTATTCAATGGCCGACAACCAAGTCCAATCTCTGTTCTCGAGCCTTCTCTTTCAATTGAAAGCTATGAATCTTCAATGAGCACAGATATCACTAGTACAGAAGGAAGCAAGTTGTGTCCTTCTGTTCAAGCTCAGGATGTTCATTGCTCGAAATTTTCAACGAAGTTCCATCCTGCTGAACCTGATGCAGAGTTATCTGATTCAGCTTCTTCAACATCAATTGGGACCAAGCACACAAGTACATTTGTTGTGATGAAGTTTGGTGCAAGATCAAGTACATGGGAGTTGGACTATGTGAAAGATATATTATCTAATGCGGAAATGATGTATATGGACTTTTCCCTCGGTCAAACTCGCACGGTTGTAGACCCTCGTCTATTCAACAAGTTGGAGAGTGGAAAGGGAGGGTTTGAGTTCGATGATGGCGTGGCTAGGATAAGAAGGAAAGTCATATTTGATTGTGTGAGTGAATATTTGGACTTAAGATACAAGCACTATGTAGGGGGAGGATACAAAATGTGGGCTAAAGGGGTTGCAATGTTGAAAAGAAATGAATGGTTGGCAGAAGAAGTGTATAAAGAAATTCCAGGTTGGAGAAAGATGGGGGATTCAATGGTGGATGAGCTTGTTGACAAAGACATGAGTAGCCAATATGGAAGGTGGCTAGATTTTGAGGTTGATGCTTTTGAACTAGGAGCAGAGATTGCTGATCAAATGTTTAATTATTTGGTTGATGATGTTGTTGCTGATATATTGCACCTGTAA 2787 0.4069 MGVEKEGTKSGGGYVGGFFQLFDWTSKSRKKLFANKSELPEPLKHGRKANYKKTMTQPYLANEDESEVLASVRRSCDHSYASSVTDDESCGTRAPNVVAKLMGLDSLPPSHFSDPYSSPYFDTLSLQESQYFSRNLNDEHDHQTLYSGKLIEKAEGSSRNYVEPKPQKTVTRPIEKFQTEVLPPKSAKSIPVTHHKLLSPIKCPGFVPTNNAAYIMEAAARIIEPGSQFTTKAKTHLVSSSAVSLRVKDLKDKVEASQKGSLIGPSLSRARDLKGKREISHRTTRISEPSERSLELNAAKYLKGQPLNKSWNGSVDTSSIRSPTYAEEDSSLKNKGRSISLAVQAKVNVQRREGLSSSGGRSMVGQKEHLDTKPNQKSKANVQKILHKKSSGALRQNNLKQNGLVEKDKLPSKPSVSNSHSRKVLSSDSPYSRHRSSSSKSIAKVGSRKSATEVTDSEKEVLYTSTNNFPRKKRTTDKDWNDRVVDNLFIDKTPKPVQPKLVSNKQYNWAEETTNKDTDVVSFTFTTPLSRKNPGLETSGQARQKTIGLSLDQRIKRVSLDTDNTRSPIGYNVIGGDALGMLLEQKLRELTNAVETSCHDVSRVRQPSKAAPKSNNTVTKLNLVNLNARLQQKKDQDVLFTDNISSSQDSGISFTGLPEISSKHNSWVDEMDPLLFNGRQPSPISVLEPSLSIESYESSMSTDITSTEGSKLCPSVQAQDVHCSKFSTKFHPAEPDAELSDSASSTSIGTKHTSTFVVMKFGARSSTWELDYVKDILSNAEMMYMDFSLGQTRTVVDPRLFNKLESGKGGFEFDDGVARIRRKVIFDCVSEYLDLRYKHYVGGGYKMWAKGVAMLKRNEWLAEEVYKEIPGWRKMGDSMVDELVDKDMSSQYGRWLDFEVDAFELGAEIADQMFNYLVDDVVADILHL* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0863 928 MobiDBLite consensus disorder prediction 307 334 - -
Lan19g0863 928 Pfam DUF761-associated sequence motif 82 113 IPR032795 -
Lan19g0863 928 PANTHER EXPRESSED PROTEIN 1 926 - -
Lan19g0863 928 MobiDBLite consensus disorder prediction 412 450 - -
Lan19g0863 928 MobiDBLite consensus disorder prediction 270 289 - -
Lan19g0863 928 Pfam Domain of unknown function (DUF4378) 769 920 IPR025486 -
Lan19g0863 928 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 926 - -
Lan19g0863 928 MobiDBLite consensus disorder prediction 349 363 - -
Lan19g0863 928 MobiDBLite consensus disorder prediction 307 327 - -
Lan19g0863 928 MobiDBLite consensus disorder prediction 258 291 - -
Lan19g0863 928 MobiDBLite consensus disorder prediction 349 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0863 Lan-Chr19 16112762 16117532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0863 16 926 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 30.319 3.99e-91 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0863 - - gmx:102669513 1285.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0195 16 1532761 1537674 Lan19g0863 19 16112762 16117532 LSH
Lan12g0884 12 15882941 15887988 Lan19g0863 19 16112762 16117532 PCT
Lan19g0863 19 16112762 16117532 Lan12g0884 12 15882941 15887988 PCT