Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0829 ATGTCTGCAAAAGTTATCAATAATCTCGATTGTGGTTCTATGCTTATGCTTCCCTCAAATGATACTGGTGATATTCCCCCTCCCTTCAATATTGATGATAAAATTGATCCAGGTTTTGGAATGGAGATGAAATTTCCATCAAATGTGAATAGCGGCAATATTCCTATGTGTTCTGTCACAGGGAATGTTTCACATGTGGACCAGAGTTTCTGTGGCTATATGCAGCAGCCTGATTTTGTGAGTGGATGGATGTATGTGAATGAAAATGGGCAAATGTGCGGTCCCTATATTAAGGAGCAGTTATATGAGGGCCTAACTACTGGTTTCTTGCCACACGAGCTTCCTGTGTATCCTTTGATGAATGGCAGATTAATGAATCATGTGCCATTGAATTATTTCAAGCAGTTTCCTGACCATGTTTCCACTGGGTTTGCACATCTGAGTCTAAGCATCTCAGACACAAGGATGCCTTCAAATTGCTCCTCCTCCTCCTTGTCTTGTAAGGATGTGACAGTACACGAGCAAGATAGATCCTTTGGGAATGCTTTTCCCCTGGATGTTATGTCTGATTTACAGTCACATGTCAATTACTCCCTGAATGAGTCCAATCACCTAGTTTCAAACTCAGAGGCGTTCAGCAGTATGATATCTTCTCAGATGTTAGTTGAAGAGTGCTGTTGGTTTTATGAGGATGAAAATAGTATGAAACATGGGCCACACTCTCTTTCAGATTTGATTTCCTGGCACCGAAATGGATATCTTAAAGATTCATCCATGATCTCTCGTTCTGACAATAAGTGTGCCCCCTTTATGCTACTATCTGCTGTAAATGCATTTGAAGGAGAAACCATATGTAGATCAGGTTCAAAAAGTAATGAGGTTGATGGTAGGGTAAACATAATTTGTGAAATATCTGAGAGCATCTCTTCCCAATTACACTTGGGTGTCATGAAAGCTGCACGCAGAGTTGTGCTAGATGGGATTATTGGCGATATCATTGCAGAATTTGTTACTGAAAGGAAATATAAGAAGCATAAGCTCGAATCAGCTGAACAGGCTTCTGAGACTTGCATGTTGGATAGCAAAAAGTCCAAGGTTGCCTTGGAGATCAGTAAAGGTACTGCCATTCCAAGTGAGCCTGCACCTTCCCATATTTTAGCTGATCAGGCTTGTCATGAAATTTCCAGATCATCTGCAACAACCATTAAATCAGTTGGAAGCATTGAAAACTATTGGTGGTCATATGCTGTTGTTCGTAAAGTACTTTTTGATTATTGCATGCAAGTCATGTGGAATGCAGTGTTTTTTGACACTCTTACTGACTACTTATTTTCCTGGAGGAAGAAGAAGCTTTGGTCTAAGCCTAAGCATCAACCTGTCAGTGGCTGTAGATATTATGATGAAAAGAATCAAAAGATTAAATCAGAAGACTTACTTCTCAGGTCAAGTTCCTCTGAATACAATGCTGATTGCTGTGATAAGTTTGGAGTGCTTGCAATTAAAAGAGATTGTCATGCTCAATCATCTTTATCTTGTAGTGGCATCAGACGTGGATACTTGCTAGAAGGTCGTAGAGTTTCACGCCCTCATCACAACTCTAAAGATTTGACATGCACAGTTTCACGCCCTCATCATAACTCTAAAGATTTGACATGCATTCTTGAAAGTGTGGAGAATGAACTTCATGTCTCATCAATGGAGTTTTTTGTTGAATACATTAAAAGTTTTGTTGAAAAGGAAGTGAACAATTTATTTCATTCCCCAGAAAACAAATTGAATGAGGTTGCTGTTAGTGACTGTGGTTTTTCAGAGATACTTACTGATAAAACACCTGTGAAGGAAATACTAGATGACCAATCTGTGGCTCCTACAAAAGAAAAGGATTTATTTTGCGAGTCTTCATCTAAAAACCCAATGTCTGATGTATTTGCAAATGCATTTAAGGAGTTGTGTGGATTTGTAGATGATGTTGTTGATGAGGAGGAGATTGATGACATACCACCTGGATTTGAAGAGAACTTTCAGACAAGTTTGCCTCACTACAATTCTAAATTTCGACCTTCAAGGTTAATCGAATGTAATCCTAAGATGACAGGATATGTTGCAACCGCACTGTGCCGACAGAAGTTGCATGATGAAGTTATGGATGAGTGGAAGTCATTGTTTCTCGATTCTGCATTGAATAAAGTTTTTATAGCTTTTACCGTGAAGAAAAAATTTCAGTCTGTTGGTCATGAAAAAGGGAAAACATTCAATGCAAGCAAGAGACATTTGAACGATTCTACTTCTAGACTGGGAAGAATGATGGAAGGATCAAAAATTTCTTCGGGAGTTCCTCTGGTCAGTGCAAAGCAAATATATTACCATGAGAAACTGTCACGGAAAGAGTTGGGTTCCTCTCAATCTGTATCAGTAGATGATTCTGGTCCCAGGAAGCAGTCTGTGGCTAAGTTAAGGAAACATGCTTCTGGTGGTTTGAATAAGACTGCAGAAGTTAAACTAGCCTATAATAATAGTGGAAAGACAAGGATGATTAAAAGGAAGAAGGATGTATTTGCTAAGGGAAGGTCTTCTCCTGTAAATGTTAATGGTAGCTTGCACAGTGATCAATCATCGTTGAAGAATAAATCCAGTCGAAAAGTATTGAAGTTTTCGCATACAGTTCAAAGTGATGTTTTGGATGTTGAAAAATCTAATGAAAAGAGGCTTTCAACATCAATAGATAATAGTGTTGGCATGAGGAAGGGGGTTAGAATTGATGGGTGTGAAGGCACCATTCAAGGGAAGACCACTGGGCATAGCTCCAGAGAGATGCTTAATGTGAAAAGTACAGTATCAAAATCTAAAAGGAAGCATCTAATGGACCAGGATGATATGCCATCCTTACAGCAACCAGGGAAGGTTTTGAAAATTTCAAATGGTAAGAAGCAGGGGGCTAGGAAACAGGTTATGGTGGCAATGAATAATTCTGCTAAATCCAAGCCGTTGGATTTATGCCCTAGATCTGATGGATGTGCCAAGACTTCTATTGATGGGTGGGAATGGCATAAATGGTCTCAAAATGCCAGTCCTGCACTTAGAGCACGTGTCAGGGGCCTTACATGTGTACAGAACAAGATCACAGATTCTGATAATAATTTTACTCATTTGTCCAATGGTAAGGGTCTTTCTGCAAGAACAAATAGGGTAAAATTGCGTCGTCTTCTTGCTGCTGTAGATGGTGCAGATCTTCTGAAAGTGCCTCAATTAAAGGCAAGGAAAAAACATTTACGTTTTCAAAGGAGCAAGATACATGACTGGGGCCTTGTCGCCTTGGAGCCAATAGAGGCAGAGGATTTTGTGATTGAATATATTGGAGAACTAATCCGTCCTCGGATATCTGATATACGTGAACATCAGTATGAAAAGATGGGAATTGGAGGCAGTTACCTCTTTAGAATTGATGATGATTATGTGGTTGATGCTACAAAGAGAGGTGGGATTGCAAGATTTATTAACCATTCCTGTGAGCCCAACTGCTACACAAAAGTTATATCTGTGGAGGGTCAAAAGAAGATTTTCATATATGCAAAGCGGCATATAGCCGCGGGCGAAGAAATTACATACAACTATAAGTTCCCCTTGGAAGAGAAAAAGATCACCTGCAACTGTGGTTCCAGAAAGTGTCGTGGATCAATGAATTAG 3684 0.3955 MSAKVINNLDCGSMLMLPSNDTGDIPPPFNIDDKIDPGFGMEMKFPSNVNSGNIPMCSVTGNVSHVDQSFCGYMQQPDFVSGWMYVNENGQMCGPYIKEQLYEGLTTGFLPHELPVYPLMNGRLMNHVPLNYFKQFPDHVSTGFAHLSLSISDTRMPSNCSSSSLSCKDVTVHEQDRSFGNAFPLDVMSDLQSHVNYSLNESNHLVSNSEAFSSMISSQMLVEECCWFYEDENSMKHGPHSLSDLISWHRNGYLKDSSMISRSDNKCAPFMLLSAVNAFEGETICRSGSKSNEVDGRVNIICEISESISSQLHLGVMKAARRVVLDGIIGDIIAEFVTERKYKKHKLESAEQASETCMLDSKKSKVALEISKGTAIPSEPAPSHILADQACHEISRSSATTIKSVGSIENYWWSYAVVRKVLFDYCMQVMWNAVFFDTLTDYLFSWRKKKLWSKPKHQPVSGCRYYDEKNQKIKSEDLLLRSSSSEYNADCCDKFGVLAIKRDCHAQSSLSCSGIRRGYLLEGRRVSRPHHNSKDLTCTVSRPHHNSKDLTCILESVENELHVSSMEFFVEYIKSFVEKEVNNLFHSPENKLNEVAVSDCGFSEILTDKTPVKEILDDQSVAPTKEKDLFCESSSKNPMSDVFANAFKELCGFVDDVVDEEEIDDIPPGFEENFQTSLPHYNSKFRPSRLIECNPKMTGYVATALCRQKLHDEVMDEWKSLFLDSALNKVFIAFTVKKKFQSVGHEKGKTFNASKRHLNDSTSRLGRMMEGSKISSGVPLVSAKQIYYHEKLSRKELGSSQSVSVDDSGPRKQSVAKLRKHASGGLNKTAEVKLAYNNSGKTRMIKRKKDVFAKGRSSPVNVNGSLHSDQSSLKNKSSRKVLKFSHTVQSDVLDVEKSNEKRLSTSIDNSVGMRKGVRIDGCEGTIQGKTTGHSSREMLNVKSTVSKSKRKHLMDQDDMPSLQQPGKVLKISNGKKQGARKQVMVAMNNSAKSKPLDLCPRSDGCAKTSIDGWEWHKWSQNASPALRARVRGLTCVQNKITDSDNNFTHLSNGKGLSARTNRVKLRRLLAAVDGADLLKVPQLKARKKHLRFQRSKIHDWGLVALEPIEAEDFVIEYIGELIRPRISDIREHQYEKMGIGGSYLFRIDDDYVVDATKRGGIARFINHSCEPNCYTKVISVEGQKKIFIYAKRHIAAGEEITYNYKFPLEEKKITCNCGSRKCRGSMN* 1228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0829 1227 Pfam GYF domain 227 270 IPR003169 GO:0005515
Lan19g0829 1227 SUPERFAMILY SET domain 1083 1224 IPR046341 -
Lan19g0829 1227 SMART PostSET_3 1211 1227 IPR003616 -
Lan19g0829 1227 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 40 1227 - -
Lan19g0829 1227 Gene3D - 213 302 IPR035445 -
Lan19g0829 1227 Gene3D - 72 147 IPR035445 -
Lan19g0829 1227 ProSiteProfiles GYF domain profile. 224 274 IPR003169 GO:0005515
Lan19g0829 1227 ProSiteProfiles SET domain profile. 1088 1205 IPR001214 GO:0005515
Lan19g0829 1227 MobiDBLite consensus disorder prediction 798 823 - -
Lan19g0829 1227 SMART set_7 1088 1211 IPR001214 GO:0005515
Lan19g0829 1227 Pfam SET domain 1100 1204 IPR001214 GO:0005515
Lan19g0829 1227 SUPERFAMILY GYF domain 218 276 IPR035445 -
Lan19g0829 1227 ProSiteProfiles Post-SET domain profile. 1211 1227 IPR003616 -
Lan19g0829 1227 SMART gyf_5 225 279 IPR003169 GO:0005515
Lan19g0829 1227 Gene3D SET domain 1042 1227 IPR046341 -
Lan19g0829 1227 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 40 1227 IPR044570 GO:0042800|GO:0051568
Lan19g0829 1227 MobiDBLite consensus disorder prediction 858 877 - -
Lan19g0829 1227 CDD SET_SETD1 1076 1223 - -
Lan19g0829 1227 MobiDBLite consensus disorder prediction 852 877 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0829 Lan-Chr19 14778866 14794297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0829 1087 1227 C2H2 Transcription Factor Family AT2G23740 37.423 1.66e-18 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lan19g0829 SET 8.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0829 - - lang:109334426 2439.07