Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0817 ATGGCTTATTCATTATCATTTCATGCTTCAACATTTATGGTTGAAATAATTATCATTTTCATATTGGGTTGCATGCCATATAGTGCTCTTGGTACTGATGCAAAAATGGTCATAGACTCTCCTTTGTTAACAGAAATGTTAGGAATTAATCGAACTATCATAGTAGATATTAATGGAAAAGGGGATTTCAAATCTGTCCAAGCTGCCATAGATTCCATTCCTGAAGGAAATTCTAATTGGGTAATTGTGCATGTTAGGAAAGGAGTATACAGAGAAAAGGTTCACATACCAAAGACTAAGCCTTATATATTCATGAGAGGGAATGGGAAAGGAAAAACTGCCATTGTTTGGTCACAAAGCTCTGAGGACAACGTGGCTTCTGCTACCTTCAAAGCTGAAGCAAATGACTTTATTGCCTTTGGAATTAGCTTCAAGAACGAGGCACCTACTGGGGTTGCATATACATCACAGAACCAATCGGTGGCCGCATTTGTGGCAGCAGATAAAATAGCATTCTACCATTGTGCATTTTATAGTACTCATAACACACTCTTTGATTACAAGGGAAGACATTACTATGAGTCCTGCTACATTCAAGGCTCAGTTGATTTCATATTTGGTCGTGGAAGATCAATATTCTATGGTTGTGAAATGTTTGTGATTGCTGATGGAAGGGTAACAATTCATGGGTCAGTCACAGCTCAACATAGGGAAGAAGAGCATGAGATTAGTGGATTCATCTTTATCAGAGGCAAGATCTATGGCATTGGTGGGGTGTACTTAGGAAGGGCTAAAGGTCCTTTTTCTAGGGTCATTTTTGCCATGACATATATTTCTAAGACCATTGTGCCTGAGGGGTGGACCAATTGGAGCTATGATGGTAGCACACAAAATCTATTGATGGGGGAATACAAGACTCATGGACCTGGAGGCAATGTAGAAGGACGTGTTCCTTGGTCAAGGCAACTTACTGATGAAGAAGTTGCACCCTATTTGTCTATTGATTACATTGACGGAAAGAATTGGTTGCCAGCTTATTGGAAATAA 1047 0.3945 MAYSLSFHASTFMVEIIIIFILGCMPYSALGTDAKMVIDSPLLTEMLGINRTIIVDINGKGDFKSVQAAIDSIPEGNSNWVIVHVRKGVYREKVHIPKTKPYIFMRGNGKGKTAIVWSQSSEDNVASATFKAEANDFIAFGISFKNEAPTGVAYTSQNQSVAAFVAADKIAFYHCAFYSTHNTLFDYKGRHYYESCYIQGSVDFIFGRGRSIFYGCEMFVIADGRVTIHGSVTAQHREEEHEISGFIFIRGKIYGIGGVYLGRAKGPFSRVIFAMTYISKTIVPEGWTNWSYDGSTQNLLMGEYKTHGPGGNVEGRVPWSRQLTDEEVAPYLSIDYIDGKNWLPAYWK* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0817 348 ProSitePatterns Pectinesterase signature 2. 198 207 IPR033131 -
Lan19g0817 348 Gene3D - 47 347 IPR012334 -
Lan19g0817 348 PANTHER PECTINESTERASE 67-RELATED 13 347 - -
Lan19g0817 348 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 13 347 - -
Lan19g0817 348 SUPERFAMILY Pectin lyase-like 49 346 IPR011050 -
Lan19g0817 348 Pfam Pectinesterase 53 339 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0817 Lan-Chr19 14667328 14669285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0817 50 343 Carbohydrate Esterase AT5G47500 37.171 3.81e-70 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0817 - - gmx:100792967 569.311