Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0816 ATGAATCGTTTCACATGTTGGAACCCTTCCGTGGGTCCCGATGCTGGCACTCTCTGCAAAGATGGTTTGCTCTGGTACCGCGATATCGGAAAACATGCTTTCGGTGATTTCTCAATGGCTGTTGTTCAAGCTAATCAGGTTCTTGAAGACCAGTGCCAGATCGAGACTGGTAGGTTCGGTACATTTGTCGGCATCTATGACGGTCACGGTGGCCCTGATGCTGCACGATATGTCTGCGATTACTTGTTCCGTAACTTCCAAGCAATAAATGCTCAATCACAGGAACTTTCGACAGAGGAGACTATTCAAATGGCGTTCCTTCAAACTGAAGAGGGATTCACTGCTCTTGTTTCACAAATGTGGAGGAACCTGCCTGATCTTGCGACTACTGGAACTTGTTGTCTGGTTGGGATGATTTTTCAGGAGAACCTCTTTGTGGCAAGTCTTGGAGATTCTCGTCTTGTGTTGGGCACGAGAGATGGCAACAATGGTAGGGTTAATGCAATTCAGTTGTCTACGGAACACAATGCAAACATTGAGGCCATTAGACAGGAACTTGCGGATTTACACCCGCACGACCCTGATATTGTTGTTGACAAAAATGGTGCTTGGAGAGTAAAAGGCATCATTCAGGTTACTAGATCTATAGGTGACGTGTATTTGAAAGATGCACAGTTTAACCGGGCACCAATTAAACAAAAATTCAGACTTCCTGAACCAATGAACATGCCTATTTTGTCTGCTAATCCAACTATTCTTTCTCATCATCTCCAACCAAATGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGTACCTGAGTAATGAAAGAGCAGTGGATATTGTTCACAGCAATCCACATGCAGGTAGTGCCAAGAGACTTGTGAAAGCAGCCCTACATGAAGCAGCTAGAAGACGTGAAGCACAACCACACCAGCGCCAAAATCTTAACAGGAAGGATAGTGCCAAGAAACTTGTAAAGACTGTTCTACAGGGAAAACGTAAGGTGCAATATGAAGAGCTCCATAAGCTGGGGAAGGAGGTTCGGCGCGAGTTTCACGATGATATATCGGTTATTGTTTTATTCTTAAACCACGATCGTATATTACGTGGTGCAGCTGCAAATCAAGCAGTACTCTCAGTTCGAAGTGCTCTTGATCACTAA 1170 0.4427 MNRFTCWNPSVGPDAGTLCKDGLLWYRDIGKHAFGDFSMAVVQANQVLEDQCQIETGRFGTFVGIYDGHGGPDAARYVCDYLFRNFQAINAQSQELSTEETIQMAFLQTEEGFTALVSQMWRNLPDLATTGTCCLVGMIFQENLFVASLGDSRLVLGTRDGNNGRVNAIQLSTEHNANIEAIRQELADLHPHDPDIVVDKNGAWRVKGIIQVTRSIGDVYLKDAQFNRAPIKQKFRLPEPMNMPILSANPTILSHHLQPNDSFLIFASDGLWEYLSNERAVDIVHSNPHAGSAKRLVKAALHEAARRREAQPHQRQNLNRKDSAKKLVKTVLQGKRKVQYEELHKLGKEVRREFHDDISVIVLFLNHDRILRGAAANQAVLSVRSALDH* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0816 389 MobiDBLite consensus disorder prediction 306 325 - -
Lan19g0816 389 Pfam Protein phosphatase 2C 61 309 IPR001932 -
Lan19g0816 389 ProSiteProfiles PPM-type phosphatase domain profile. 36 365 IPR001932 -
Lan19g0816 389 SUPERFAMILY PP2C-like 44 366 IPR036457 -
Lan19g0816 389 ProSitePatterns PPM-type phosphatase domain signature. 62 70 IPR000222 GO:0043169
Lan19g0816 389 SMART PP2C_4 26 363 IPR001932 -
Lan19g0816 389 PANTHER ALPHABET, ISOFORM E-RELATED 318 389 - -
Lan19g0816 389 PANTHER ALPHABET, ISOFORM E-RELATED 15 312 - -
Lan19g0816 389 Gene3D - 27 371 IPR036457 -
Lan19g0816 389 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 318 389 - -
Lan19g0816 389 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 15 312 - -
Lan19g0816 389 CDD PP2Cc 34 308 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0816 Lan-Chr19 14658902 14662678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0816 23 290 PP2C-type Phosphatase Gene Family AT3G17090 68.284 6.09e-139 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0816 K01102 - gmx:100814799 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0816 19 14658902 14662678 Lan16g0221 16 1739227 1745438 LSH