Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0815 ATGGCATCATCTCTCATCTCAACAACAGATCTCTCACGTGACCATCACACGAAAAAGAAGAAGCTTCTAAAACATCACAATCAGAATCAACATCATCAACATAACCACGTCAAATGGAAATCACACAAGCACCAACAAATTTACTCATCCAAACTCCGTCAAGCGTTGACCACACTCAACCTCGCCGGAAACCGCAACGGGAAAGAACTCAAGGAAGCCGCCGACAGGCTCCTCGCCGTCACGGCCAAGGGGAGGACACGGTGGAGCCGGGCCATCCTCACCAACCGGCTCAAGCTTAAGTTCAGGAAGCAGCATAAGAGAAAGAGAGTGGTTTATTCCTCGACCGGATCAGATCGGTTTAAGAAAAAAACCCGGTTCAGCGTGTTCGGATTAAAAGGGAAAACGGTTCCGGGTTTTCAGAGGAAAGTGAAGGTTCTGGGTCGGTTGGTTCCGGGTTGCAGAAAAGAACCATTACCGGTTATTTTAGAAGAAGCTATTGATTATATACCAGCTCTTGAGATGCAGGTTCGAGCCATGACGGCTCTCTCTCAATTACTTTTCGCCTCTTCTGGTGGCGGCGCCGCCTCTAGCTCCGCCACTTTTGGTCCTTTATAA 615 0.4862 MASSLISTTDLSRDHHTKKKKLLKHHNQNQHHQHNHVKWKSHKHQQIYSSKLRQALTTLNLAGNRNGKELKEAADRLLAVTAKGRTRWSRAILTNRLKLKFRKQHKRKRVVYSSTGSDRFKKKTRFSVFGLKGKTVPGFQRKVKVLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMTALSQLLFASSGGGAASSSATFGPL* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0815 204 CDD bHLH_AtIBH1_like 133 182 IPR044549 GO:0006355
Lan19g0815 204 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 14 199 IPR044660 GO:0006355
Lan19g0815 204 MobiDBLite consensus disorder prediction 17 41 - -
Lan19g0815 204 MobiDBLite consensus disorder prediction 1 41 - -
Lan19g0815 204 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 14 199 - -
Lan19g0815 204 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 143 187 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0815 Lan-Chr19 14653987 14654821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0815 36 194 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 52.841 1.71e-47 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0815 - - gmx:100786088 213.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0815 19 14653987 14654821 Lan16g0222 16 1749073 1749981 LSH
Lan12g0899 12 15984481 15985614 Lan19g0815 19 14653987 14654821 PCT
Lan19g0815 19 14653987 14654821 Lan12g0899 12 15984481 15985614 PCT