Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0798 ATGTGCAGCATCTTTGTTCAAATCATGGAGAGTTATCAAGGTGATTTAACTGATATAGTTCGTGCTAGTAGTGGTGGAGCATATAGCAACATGGAAAGCAGCACCACAACTTCTTCATCATCACAAGCTGCAACAAATAATCACTTTTCTCATCATCATTATTGGCAGCAAAACTTTTTTTCTGACCCTATTAATTATTTCTCTTCTTTTATGGAAGGAGGCACTAACTTTGGTGATCCATTCTCAAACATGAGAGATCCTATCTTATATGACCTTGATATTATGCCTAGTTCAGGGAATAATTCTTCACCCTACTTCAACAACACCATAACAACAACGACAACATCTTCTGCTGAAATTATAAGAACTTCTTGTGGGGCTTTGGAAGATGCAGCACCTTGTTTTGGTTCAAATACTAATACTTCTACTGCTACTACTGTTTTTGGACACAAGATTCTTGAAGATAACAGCATCATGAGTTCATCAAGTCATAATACTAAGAACATATTCTCAAACATGATTCAGATCTCTCCCAATGCTACAAAATACAATTCTACTTCTCCTGTTATGGGAGCTTCTCCAAGAACAATTCAACCTTCTGCTGTAGTTTCAGGCAACATGATTAATGCAACAAATGATTTCCTTGTTGGCAACACAGGAGTTCAGATCTCATCTCCACGGAATCCGGGTCTTAAGAGAAGGAAGAATCAGGCAAAAAAGGTGGTTTGTATTCCTGCACCAGCAGCTGCAAATAGCAGACAAACTGGAGAAGTGGTGCCTTCAGATTTGTGGGCTTGGAGAAAATATGGTCAGAAACCCATCAAAGGTTCACCTTATCCAAGGGGCTATTATAGATGCAGTAGCTCAAAGGGTTGTTCTGCAAGGAAACAAGTTGAAAGGAGTAGAACAGACCCAAACATGTTAGTTATTACTTACACTTCAGAGCACAATCATCCATGGCCAACTCAAAGAAATGCTTTAGCTGGTTCATCAAGATCACAACCATCCAAGAACACCAACAATGCTTCAACTTCAAAGAATTCAGAAACTTCTCACAAAGCCATAACAATAACAAAGCCAAAAGAAGAGAAACAAGAGAGCAACAATAGTGAAGGGAATGTGTCTGTGAAGGAAGAGATAGAAATGAAAGACATAGAGAAACAACTTGAGATGGATGATGGAGAATTAAGTGATGGAATCTCTTACAAGCCATGCATGTTGGAAAATATTACTAGCCATAATAATAATAATCAATCTCATGAGGACTTCTTTGCAGAGTTGGGTGAAATAGAAACTGATCCACTAAACCTATTGTTTACTCAAGGTTTTCATGATCAGAAGGAATCTAAGGCCTTAGATCCATTCCATCTCTTTGATTGGTTAGGAGCAGGAACCAACAACCACAACAACTCATTTGAAGAACCCAATAGTAAGAGAGGGTTATAA 1446 0.3824 MCSIFVQIMESYQGDLTDIVRASSGGAYSNMESSTTTSSSSQAATNNHFSHHHYWQQNFFSDPINYFSSFMEGGTNFGDPFSNMRDPILYDLDIMPSSGNNSSPYFNNTITTTTTSSAEIIRTSCGALEDAAPCFGSNTNTSTATTVFGHKILEDNSIMSSSSHNTKNIFSNMIQISPNATKYNSTSPVMGASPRTIQPSAVVSGNMINATNDFLVGNTGVQISSPRNPGLKRRKNQAKKVVCIPAPAAANSRQTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSSRSQPSKNTNNASTSKNSETSHKAITITKPKEEKQESNNSEGNVSVKEEIEMKDIEKQLEMDDGELSDGISYKPCMLENITSHNNNNQSHEDFFAELGEIETDPLNLLFTQGFHDQKESKALDPFHLFDWLGAGTNNHNNSFEEPNSKRGL* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0798 481 MobiDBLite consensus disorder prediction 277 379 - -
Lan19g0798 481 ProSiteProfiles WRKY domain profile. 255 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan19g0798 481 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 13 462 - -
Lan19g0798 481 MobiDBLite consensus disorder prediction 304 354 - -
Lan19g0798 481 Gene3D WRKY domain 234 314 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan19g0798 481 Pfam WRKY DNA -binding domain 262 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan19g0798 481 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 13 462 IPR044810 GO:0003700
Lan19g0798 481 SMART WRKY_cls 260 320 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan19g0798 481 SUPERFAMILY WRKY DNA-binding domain 258 321 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0798 Lan-Chr19 14469554 14473592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0798 1 441 WRKY Transcription Factor Family AT2G34830 40.430 7.24e-85 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan19g0798 WRKY 2.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0798 - - aprc:113852911 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0606 4 8468424 8472198 Lan19g0798 19 14469554 14473592 LSH
Lan19g0798 19 14469554 14473592 Lan16g0243 16 1948752 1954454 LSH