Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0794 ATGATTCTACAATTTGCAATCCACATGATTATTTTTATATGTTCCATATATCCACTTGCATCTGCACAATCTGATTGTGTTTCTACATGTGGGTCTGTTAACATTCCTTACCCTTTTGGAATGAACAATCCAAATTGCTATCTAGGCAAGTGGTTTGAAATTGAATGCCGAAACGCTACTTCTGTAGCTGCTCGAAAACCTTACCTTAAATACATTGATATGGAGGTAACAAAAATTGATGAAACATATAGCACAGTTGATATAATGAATCCAATCTTTCGTTGGAATTGCTATGGAAAAACCGATATGCCTGTTATAGACCTAAGAGGTAGCCCTTTCGTCTACTCACAAAAATATGACAAATTTATCGCATTTGGTTGCAACAAACTCGCTTTTTTGCAATCAAATGGGACAACTGTTGGTGGTTGTGTGTCCATTTGTGACAACAATGAAGAGGTTAACAACAATTTCGACTTTGGAATCAATGGCTGCCACGGCAGGTATTGCTGTGAGACTTCACTGCCTTTGTATCTTTCAGAATATAACACAACGCATGCAGATCTTAAGAACAAAAGTAGTGATGAGTGTAATTATGCGCTTATTGTAAGTGAGGATTGGCTCACAAGTTACAATAACTATGACATGCTGGGTATGACGTTTATTGACCTGAAGAATATTGATTATGTTCCTGCAGTACTTGAGTGGGAGATTTTGAATGAGTCTATGATCAATTCTACACTGGAATTTTCTTTACATTCTTTCTGCAATCACTCATATATAACATCTTCTTCACAAAACAAAAACTCATCAGGTGTGAGATGTCGCTGCCTCCCAGGCTTCTATGGGAGTCCCTATATTTCAGGAGGCTGCACTGCTATACCACCGATCTTCGAGGTCAAAAATCGATCCAGAAAGTGGGCTATAGTAGGATCTTCGTCAAGCCTCGGATCAATTATTTTACTCTTTGGTTTATGGTGGTCGTATAAAGTTGTAAGGAAAAGAGTAATAAAGAAACGCAAAGAAAATTTCTTCAAACAAAATGGTGGTTTGTTGTTACAACGGAAATTGTCTTCTGACGAAGTATGTGTTGACAAAACTATTCTCTTTACCTTAAAGGACTTGGAAAGGGCCACAAACAACTTTAATATGAATAGAGTTCTTGGAAAGGGAGGCCAAGGAACAGTTTACAAAGGTATGTTAGAAGATGGTAAAATTGTTGCTGTGAAAAAGTTTAAGGTCCAAGGGAAGGTTGAAGAATTCATCAATGAATTTGTTATCCTATCACAAATTAACCATAGAAATGTGGTTAAGTTATTAGGATGTTGTTTGGAGACAGAAATTCCTTTGCTTGTTTATGAATTCATTCCAAATGGTAACCTTTTTGAATATTTGCACAACCAAAATGAAGATTTAGCAATGACTTGGGATATACGTTTAAGAATTGCAACTGAAATTGCAGGAGCACTATTTTACTTACACTCAATTGCATCTCAGCCCATTTATCATAGAGACATAAAATCAACAAATATACTATTGGATGAAAAGAATAGGGCAAAAGTAGCAGACTTTGGAACATCTAGAATAGTTTCCATAGAAGCTACTCACCTCACTACAATGGTTCAAGGTACTTTTGGATATTTGGATCCTGAGTATTTTCATACTAGTCAATTCACAGATAAGAGTGATGTCTACAGTTTTGGAGTAGTTCTTGCTGAGATTTTAACAGGGAGAAGGCCAATACCTGTGGTAAGTTCAGAAGAAGCAATGAATTTAGCTTCATATTTTGTTCTCTCTATGGAGGAGAATAATCTATTTGACATTATTGACAAAAGGTTGGAAAAGGAAGCAGATAAAGAACATATCATTGCAGTTGCAAATCTTGCATATACATGCTTAGAGTTGAATGGTAGAAAAAGACCAACTATGAAAGAAGTCACATTGGAACTAGAAAGGATAGGAGTGCCAAATAGAAAGTTTAGTACAAATCAAAACCATGAAGGAATTGAGCTTTCTAGAATTGAAGACTACCAACATTTTGGTGGATATTCTATGTCAAATACATTTTCCACTATTAGCAGCCAAACATTCTCTTAG 2094 0.3591 MILQFAIHMIIFICSIYPLASAQSDCVSTCGSVNIPYPFGMNNPNCYLGKWFEIECRNATSVAARKPYLKYIDMEVTKIDETYSTVDIMNPIFRWNCYGKTDMPVIDLRGSPFVYSQKYDKFIAFGCNKLAFLQSNGTTVGGCVSICDNNEEVNNNFDFGINGCHGRYCCETSLPLYLSEYNTTHADLKNKSSDECNYALIVSEDWLTSYNNYDMLGMTFIDLKNIDYVPAVLEWEILNESMINSTLEFSLHSFCNHSYITSSSQNKNSSGVRCRCLPGFYGSPYISGGCTAIPPIFEVKNRSRKWAIVGSSSSLGSIILLFGLWWSYKVVRKRVIKKRKENFFKQNGGLLLQRKLSSDEVCVDKTILFTLKDLERATNNFNMNRVLGKGGQGTVYKGMLEDGKIVAVKKFKVQGKVEEFINEFVILSQINHRNVVKLLGCCLETEIPLLVYEFIPNGNLFEYLHNQNEDLAMTWDIRLRIATEIAGALFYLHSIASQPIYHRDIKSTNILLDEKNRAKVADFGTSRIVSIEATHLTTMVQGTFGYLDPEYFHTSQFTDKSDVYSFGVVLAEILTGRRPIPVVSSEEAMNLASYFVLSMEENNLFDIIDKRLEKEADKEHIIAVANLAYTCLELNGRKRPTMKEVTLELERIGVPNRKFSTNQNHEGIELSRIEDYQHFGGYSMSNTFSTISSQTFS* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0794 697 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 20 696 IPR045274 GO:0007166
Lan19g0794 697 Pfam Protein kinase domain 382 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0794 697 SMART serkin_6 381 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0794 697 CDD STKc_IRAK 387 652 - -
Lan19g0794 697 Gene3D Transferase(Phosphotransferase) domain 1 455 674 - -
Lan19g0794 697 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 20 696 - -
Lan19g0794 697 Pfam Wall-associated receptor kinase galacturonan-binding 26 88 IPR025287 GO:0030247
Lan19g0794 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 500 512 IPR008271 GO:0004672|GO:0006468
Lan19g0794 697 Gene3D Phosphorylase Kinase; domain 1 347 454 - -
Lan19g0794 697 SUPERFAMILY Protein kinase-like (PK-like) 359 650 IPR011009 -
Lan19g0794 697 ProSiteProfiles Protein kinase domain profile. 381 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0794 Lan-Chr19 14360347 14369231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0794 24 675 Receptor kinase-like Gene Family AT1G69730 44.005 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Lan19g0794 Pkinase 3.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0794 - - lang:109329470 917.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0794 19 14360347 14369231 Lan16g0259 16 2040631 2043882 LSH