Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0782 ATGAAGCTCTTTAGCCTTTTAGTGTTATCATTATCTTTCTTCTCAGTTATGGGGCAGTTACCATCACAGGACATTTTAGCATTGCTGGAATTTAAGAAAGGCATAAGGCATGACCCTACTGGTTATGTTCTCAATTCCTGGAATGAGGAATCCATTGACTTTGATGGATGCCCATCTTCATGGAATGGAGTTCTATGTAATGGCGGTAACGTTGCGGGCGTTGTCCTTGATAACCTCGGTCTCTCTGCTGATGCTGATTTGAGTGTTTTTTCAAACCTCACAAAGCTTGTGAAGCTATCCATGTCCAACAATCTCATATCAGGAAATGTACCTGACAACATTGGTACTTTCGAAAGCCTTCAATTCCTGGATATCTCGAATAACCTCTTTTCTTCATCCTTACCATCGGGAATTGGTAACTTAGGTAGTTTGCAGAATCTGTCATTGGCTGGAAATAACTTCGCTGGCCTAATTCCTGACACTATTTCAAAAATGGCTTCTGTCCAGTCCTTGGACTTGAGCCGTAACTCCTTTTCTGGAGCAATGCCAGCATCATTGACTAAGCTGAAAAGCTTGGTATCTCTTAACTTGTCCCATAACAGCTTCACTGGGAAAATTCCCGAAGGTTTTGCACTGATGTCTACTCTTGAAAAACTTGACTTGCATGGGAATATGCTCGATGGTCATTTAGATGCCGAATTTATTCTTTTATCTAGAGCCAGTTACGTCGATTTCAGTGATAATAGGCTAGTGAGTTCTGATTCCCAGAGGCAGAAGTTTCTACCGCAGATATCTGAAAGTATTAAGCATCTAAATCTAAGTCATAACTTGCTAACCGGGACATTGGTTAGTGGAGCCGAGCAACCAGTTTTTGAAAACTTGAAGGTGTTGGACCTCAGCTACAATAATTTGGATGGAGAATTGCCTGGCTTTGATTTTGTTTATGATCTCCAGGTCCTTAAGCTTAGCAGCAACAGATTTTCAGGATTTATTCCTGATGGCCTACTAAAAGGAGACTCTTTGGTTTTAACCGAACTGGATTTGAGTGCCAACAATCTCTCAGGGCCACTAAGTATAATTACATCAACGACGCTGCATTTTCTTAATCTCTCGTCAAATGGATTTACCGGTGATCTGCCGCTTCTGACTGGAAGCTGTGCTGTACTTGATCTGTCAAACAACAAATTTGAAGGAAATTTAACGAGGATGGTGAAATGGGGGAACATAGAATATCTTGATCTCAGTGTGAATCATTTAACAGGGAGCATCCCTGAGGCAACTCCTCAATTTTTGAGATTGAATTATTTGAATCTGTCACATAATTCTCTTAGCAGCTTCCTCCCGAGAATCATAACACAGTATCCAAAGCTTAGAGTGCTTGACATTAGTTTCAACCAGTTAGGTGGACTACTTCTAGCTGATCTGCTCGCAATGCCTACTTTGCACGAGCTCCACCTTGAAAATAATATGATCTCTGGCAGCATTAATTTATCGTCTCCTTCTGGTCATTCCAATCTTCAAATTCTCGACCTTTCTCACAACCGGTTTAATGGCTATTTTCCTGACCAGTTTGGGTCATTAACTGGCATGAAAGTTCTCAACATCGCTGGAAATAATTTTTCTGGCTCTCTTCCAACCACTATTGCTGACATGATTTCACTCGAAACCTTGGATATGTCAGAGAATCACTTCACTGGTCCTCTACCAAATAACATGCCGAATGGCCTCAACAACTTTAATGTTTCACAAAATGATCTGTCTGGAGTTGTTCCAGAAGATCTTAGAAAGTTCACTAGTTCTTCTTTCTTTCCAGGGAATGCTAAGTTACATTTTCCAAATGGTCCTCCTGGATCAACCGCTTCGTCACCTGAAAGTTCCAAGAGGAAACATATGAACACTATCGTTAAAGTAATAATTATAGTATCATGTGTGGTTGCTCTCTTCATATTAATCTTGCTTGCTATCTTCATACACTACATACGTATATCAAGATCTTCACCGGAATATGATACAAGTAAAGATATCCATGGACGTGCTCAACCAATCATCTCTGGCCCCATCCCTGTTCGTACATCAGAAAGGGGTGGTGCTTTGGTTGTATCAGCTGAGGACCTTGTGACCTCACGTAAAGGATCACCGTCAGAGGCAATCAGCCCCGATGAAAAAATGGCAGCTGTAACTGGTTTCTCTCCATCTAAAGTCAGCCGCTTTTCGTGGTCACCAGAGTCTGGTGATTCACTTCCTGCTGAAAATCTTGCAAGGCTAGACACAAGATCCCCGGATAGGTTGGTTGGAGAGCTGCATTTTCTTGATGATACAATAGCATTGACACCCGAGGAGCTGTCAAGGGCTCCGGCTGAAGTTTTGGGCAGAAGCAGTCATGGTACTTCTTACAAAGCAACTCTGGACAATGGTTTATTGTTGAGAGTAAAGTGGTTGAGAGAAGGAGTAGCGAAACAGAGAAAAGAATTTGTTAAAGAGATTAAAAAGTTTGCAAACATCAGACATCCTAATGTTGTGGGATTGAGAGGATATTATTGGGGCCCTACGCAGCACGAGAAGCTTATTCTTTCAGATTACATCTCACCGGGAAGTCTTGCAAGTTTTCTTTACGATCGGCCAGGAAGAAAAGGTCCACCATTGACATGGGCACAGAGGCTCAAAATAGCAGTTGATGTAGCACGTGGCCTGAACTATCTCCATTTTGATCGTGCCGTTCCTCACGGGAACCTCAAAGCTACAAATGTGTTGCTAGATACAGCTGATATGAATGCGCGTGTTTCTGATTATTGCCTTCACCGACTTATGACTCAGGCTGGTACCGTTGAACAGATTCTTGATGCAGGGGTTTTGGGCTATCGTGCGCCAGAATTAGCTGCTTCCAAGAAACCAATGCCCTCCTTCAAATCCGATGTTTACGCTTTTGGAGTGATACTTTTGGAACTTTTATCTGGAAGGTGCGCTGGTGATGTGATATTTGGAGACGAGGGAGGTGCTGATCTGACCGATTGGATAAGGTTGCGCGTTTCAGAAGGTCGAGGCTCAGAATGTTTTGATGCTACATTGATGTCAGAAATTAGTAATACTGCTGTAGAAAAGGGAATGGAGGTTCTAGGTATAGCCATTCGATGCATTAGATCTGTTTCCGAAAGGCCGGGAATCAAGACTATATACGAAGATCTTTCTTCTATATAG 3195 0.4222 MKLFSLLVLSLSFFSVMGQLPSQDILALLEFKKGIRHDPTGYVLNSWNEESIDFDGCPSSWNGVLCNGGNVAGVVLDNLGLSADADLSVFSNLTKLVKLSMSNNLISGNVPDNIGTFESLQFLDISNNLFSSSLPSGIGNLGSLQNLSLAGNNFAGLIPDTISKMASVQSLDLSRNSFSGAMPASLTKLKSLVSLNLSHNSFTGKIPEGFALMSTLEKLDLHGNMLDGHLDAEFILLSRASYVDFSDNRLVSSDSQRQKFLPQISESIKHLNLSHNLLTGTLVSGAEQPVFENLKVLDLSYNNLDGELPGFDFVYDLQVLKLSSNRFSGFIPDGLLKGDSLVLTELDLSANNLSGPLSIITSTTLHFLNLSSNGFTGDLPLLTGSCAVLDLSNNKFEGNLTRMVKWGNIEYLDLSVNHLTGSIPEATPQFLRLNYLNLSHNSLSSFLPRIITQYPKLRVLDISFNQLGGLLLADLLAMPTLHELHLENNMISGSINLSSPSGHSNLQILDLSHNRFNGYFPDQFGSLTGMKVLNIAGNNFSGSLPTTIADMISLETLDMSENHFTGPLPNNMPNGLNNFNVSQNDLSGVVPEDLRKFTSSSFFPGNAKLHFPNGPPGSTASSPESSKRKHMNTIVKVIIIVSCVVALFILILLAIFIHYIRISRSSPEYDTSKDIHGRAQPIISGPIPVRTSERGGALVVSAEDLVTSRKGSPSEAISPDEKMAAVTGFSPSKVSRFSWSPESGDSLPAENLARLDTRSPDRLVGELHFLDDTIALTPEELSRAPAEVLGRSSHGTSYKATLDNGLLLRVKWLREGVAKQRKEFVKEIKKFANIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNVLLDTADMNARVSDYCLHRLMTQAGTVEQILDAGVLGYRAPELAASKKPMPSFKSDVYAFGVILLELLSGRCAGDVIFGDEGGADLTDWIRLRVSEGRGSECFDATLMSEISNTAVEKGMEVLGIAIRCIRSVSERPGIKTIYEDLSSI* 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0782 1064 SUPERFAMILY RNI-like 243 399 - -
Lan19g0782 1064 ProSiteProfiles Leucine-rich repeat profile. 293 315 IPR001611 GO:0005515
Lan19g0782 1064 Pfam Leucine Rich repeat 293 307 IPR001611 GO:0005515
Lan19g0782 1064 Pfam Leucine rich repeat N-terminal domain 22 67 IPR013210 -
Lan19g0782 1064 Gene3D Transferase(Phosphotransferase) domain 1 862 1064 - -
Lan19g0782 1064 PANTHER OS07G0626500 PROTEIN 6 1064 - -
Lan19g0782 1064 SUPERFAMILY Protein kinase-like (PK-like) 786 1060 IPR011009 -
Lan19g0782 1064 Pfam Leucine rich repeat 504 564 IPR001611 GO:0005515
Lan19g0782 1064 Pfam Leucine rich repeat 408 467 IPR001611 GO:0005515
Lan19g0782 1064 Pfam Leucine rich repeat 143 201 IPR001611 GO:0005515
Lan19g0782 1064 SUPERFAMILY RNI-like 98 586 - -
Lan19g0782 1064 Gene3D Phosphorylase Kinase; domain 1 776 860 - -
Lan19g0782 1064 PANTHER - 6 1064 - -
Lan19g0782 1064 ProSiteProfiles Protein kinase domain profile. 783 1064 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0782 1064 MobiDBLite consensus disorder prediction 608 627 - -
Lan19g0782 1064 Gene3D Ribonuclease Inhibitor 291 449 IPR032675 -
Lan19g0782 1064 Gene3D Ribonuclease Inhibitor 450 609 IPR032675 -
Lan19g0782 1064 Gene3D Ribonuclease Inhibitor 20 288 IPR032675 -
Lan19g0782 1064 SMART LRR_typ_2 189 212 IPR003591 -
Lan19g0782 1064 SMART LRR_typ_2 430 453 IPR003591 -
Lan19g0782 1064 SMART LRR_typ_2 93 117 IPR003591 -
Lan19g0782 1064 SMART LRR_typ_2 141 164 IPR003591 -
Lan19g0782 1064 SMART LRR_typ_2 551 575 IPR003591 -
Lan19g0782 1064 SMART LRR_typ_2 314 338 IPR003591 -
Lan19g0782 1064 SMART LRR_typ_2 504 526 IPR003591 -
Lan19g0782 1064 SMART LRR_typ_2 291 313 IPR003591 -
Lan19g0782 1064 SMART LRR_typ_2 165 188 IPR003591 -
Lan19g0782 1064 Pfam Protein tyrosine and serine/threonine kinase 787 984 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0782 Lan-Chr19 14232797 14244235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0782 1 1052 Receptor kinase-like Gene Family AT1G55610 27.197 5.82e-80 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan19g0782 PK_Tyr_Ser-Thr 1.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0782 - - gmx:100793639 1747.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0590 4 8268884 8273917 Lan19g0782 19 14232797 14244235 LSH
Lan19g0782 19 14232797 14244235 Lan16g0273 16 2164173 2169272 LSH