Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0781 ATGAGGAAGGTCCTTGGGAAGGGACTCTTTATTGTAGTGATTTTGGTAATAATAGTCTCAGTCACAGTGAGTATTGTAGAGGCTCAATCAAAGTCTTTTCTCATAGATTGTGGTTCAAATTCTTCTGTAAATGTTGATGGTAGAAAATGGGTTGGGGACATGGCCCCTAATAATAATGTCACACTCAGTTCATCTGGTTTTGTTGTTTCCACTTCTACATTAAGTGGAAATTCAATATATGACCCTCTCTACAAAACAGCTAGAATCTTCACAAGCTATTTAAATTACACAATCAAAGGAGTTAAGGGAAACTATTTTGTTAGGTTCCATTTCTGCCCCTTTGTGAATGAGGACTATAATCTGAATAAGTCCTCCTTTGGTGTTGTGGCCAATGGTATGAAAGTATTGTCGGAGTTCAATGTTCCGTTAGAGATATCTGATGAGAATATGGAATTGCAGAAGTCTGGAAAGAATTCTAGTTCATTTTTCTTGGTTAAGGAGTATGTTATGGCTATCAATGTGGATACACTTGTGATTGAGTTTGTTCCATCTGGAAGCTCATTTGGTTTCATCAATGCCATTGAGATTGTTTCGTTTGTGGACGAGCTTTTTCCTGGCTCAGTCGGCAAAGTTGGTGGTGGAAACTTGAATTTGACTGGACGTTCGATGGAGACTATGTATAGGTTGAATGTTGGTGGTTCTAAGATTCAGTCCAATCAGGATCCTGATCTTTGGAGAACTTGGGAAGTGGATTCTAGCCATATGATCACAGCAAATGCTGGCTCTGGAGTTAAGAACACTTCTAATATTACATATGCTTCCGTGAACGATACTTCAATGGCTCCTCTCCTTGTGTATGAAACTGCAAGGGCAATGACTAACAATGAAGTCTTGGAGAAGAGATTTAATATGTCATGGAAATTTGAAGTGGATCCGGATTTTGATTATTTGGTCCGGTTGCATTTCTGTGAGCTGGTTTATGATAAGGCAAACGAGAGAATTTTCAGGATCTACATAAATAACAGGACAGCTGCAGATAATTTTGATGTTTACGTACGAGCAGGAGGGATGAATAAAGCATATCACCAGGATTATTTTGATTCCTTGTCGTCGAAGATTGACACACTTTGGGTTCAACTCGGTCCTGACACAGCTGCTGGTGCTGCAGGAACTGATGCTCTCTTGAATGGACTAGAGGTTTTCAAGCTTAGCAAAAACGGGAATCTTGCATCTGTACAGAGATATGACTCAGCTGACAATGCAACAAGCAAATCAAAGGGAAAAGTTCTTTGGGTAGGAATTGGAGCAGGTGTAGCTTCTGCATTGGTACTTGCTATTGTGATTGTTCTTGTTTTATGTTTCTGCAGAAGCCGAAGGAAAGCATCAACTGATACAAAAAATAACCCTCCGGGATGGCGACCATTGTTCCTGTACGGGGCTGCTCTTAACAGCACTGTGGGTGCCAAGGGATCAGCAGGAACTCAAAAGGCATATGGATCTATGGCCTCAACCAGAGTTGGCAAAAAGTTTACACTGGCAGAAATTAATGCTGCTACTAAAAACTTTGATGAGAGTTTGATAATTGGGGTTGGAGGTTTCGGTAAGGTGTATAAGGGAGAGATTGATGATGGTGTCCTTGCTGCAATCAAGAGAGCCAACCCACAGTCCGAGCAAGGTCTGACTGAATTCGAGACAGAAATTGATATGCTCTCCAAACTCAGGCATAGGCATCTAGTGTCCTTGATTGGTTTCTGTGAAGAGAAAAATGAAATGATTTTGGTTTATGAGTATATGGCAAATGGAACTCTTAGAAGTCATCTATTCGGCAGTGATCTCCCCCCATTAAGTTGGAAGCAACGTCTAGAAGCGTGCATCGGCGCTGCAAGAGGACTTCACTACCTTCATACAGGAGCGGACCGTGGAATAATACACAGGGATGTCAAGACAACCAATATATTGCTAGATGAGAATTTTGTTGCCAAAATGGCTGATTTTGGTTTATCAAAAGATGGACCTGCTTTGGACCATACTCATGTTAGTACAGCTGTGAAAGGAAGTTTCGGCTATCTAGACCCCGAATACTTTCGACGACAACAGTTGACCGAGAAATCAGATGTTTACTCTTTTGGAGTGGTGTTGTTTGAATGTGCTTGTGCAAGAGCTGTTATAAATCCTACCTTGCCTAGGGATCAGATCAACCTTGCAGAATGGGCAATGAGATGGCAAAAGCAAAAATCACTTGAGACAATTATAGACCCTCATCTTAGAGGAACCTATTGCCCTGAATCCTTGACCAAGTTTGGGGAGATAGCTGAAAAATGTCTTGCCGATGATGGGAAGAGCCGGCCAACGATGGGGGAGGTGTTATGGCACTTGGAGTATGTCTTGCAGCTACATGAAGCTTGGCTAAATATGCACAACTCAGAAACTTCTTTCTCAAGTAATCAAGTTTTGAAAGTTGAAGGACTAGAAGTTTTGCATGAGCCTTCAAGTGAAGATGAAGAAGATGCCTTAAATCTCAAAGAGTAA 2529 0.4132 MRKVLGKGLFIVVILVIIVSVTVSIVEAQSKSFLIDCGSNSSVNVDGRKWVGDMAPNNNVTLSSSGFVVSTSTLSGNSIYDPLYKTARIFTSYLNYTIKGVKGNYFVRFHFCPFVNEDYNLNKSSFGVVANGMKVLSEFNVPLEISDENMELQKSGKNSSSFFLVKEYVMAINVDTLVIEFVPSGSSFGFINAIEIVSFVDELFPGSVGKVGGGNLNLTGRSMETMYRLNVGGSKIQSNQDPDLWRTWEVDSSHMITANAGSGVKNTSNITYASVNDTSMAPLLVYETARAMTNNEVLEKRFNMSWKFEVDPDFDYLVRLHFCELVYDKANERIFRIYINNRTAADNFDVYVRAGGMNKAYHQDYFDSLSSKIDTLWVQLGPDTAAGAAGTDALLNGLEVFKLSKNGNLASVQRYDSADNATSKSKGKVLWVGIGAGVASALVLAIVIVLVLCFCRSRRKASTDTKNNPPGWRPLFLYGAALNSTVGAKGSAGTQKAYGSMASTRVGKKFTLAEINAATKNFDESLIIGVGGFGKVYKGEIDDGVLAAIKRANPQSEQGLTEFETEIDMLSKLRHRHLVSLIGFCEEKNEMILVYEYMANGTLRSHLFGSDLPPLSWKQRLEACIGAARGLHYLHTGADRGIIHRDVKTTNILLDENFVAKMADFGLSKDGPALDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFECACARAVINPTLPRDQINLAEWAMRWQKQKSLETIIDPHLRGTYCPESLTKFGEIAEKCLADDGKSRPTMGEVLWHLEYVLQLHEAWLNMHNSETSFSSNQVLKVEGLEVLHEPSSEDEEDALNLKE* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0781 842 Pfam Protein tyrosine and serine/threonine kinase 528 790 IPR001245 GO:0004672|GO:0006468
Lan19g0781 842 Gene3D Transferase(Phosphotransferase) domain 1 598 820 - -
Lan19g0781 842 PANTHER OS07G0166700 PROTEIN 22 822 IPR045272 GO:0004714|GO:0006468
Lan19g0781 842 PANTHER OSJNBA0058K23.13 PROTEIN 22 822 - -
Lan19g0781 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Lan19g0781 842 ProSitePatterns Protein kinases ATP-binding region signature. 528 550 IPR017441 GO:0005524
Lan19g0781 842 Gene3D - 221 405 - -
Lan19g0781 842 Gene3D - 29 199 - -
Lan19g0781 842 ProSiteProfiles Protein kinase domain profile. 522 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0781 842 Pfam Malectin-like domain 35 402 IPR024788 -
Lan19g0781 842 SMART serkin_6 522 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0781 842 Gene3D Phosphorylase Kinase; domain 1 485 597 - -
Lan19g0781 842 SUPERFAMILY Protein kinase-like (PK-like) 500 794 IPR011009 -
Lan19g0781 842 CDD STKc_IRAK 528 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0781 Lan-Chr19 14224105 14227388 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0781 1 837 Receptor kinase-like Gene Family AT1G30570 63.853 0.0 1129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lan19g0781 Malectin_like 1.5e-35 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0781 - - gmx:100791403 1335.47