LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan19g0779	ATGGCTAACAAATACTCTGAACCTCATATCTGTCAATGTTTGAGTGGCTTGTTAACTTCCCGACGATACTTACCTGTCACTATCTCCGGCCACCGTCGCAAAAATGGGGAACAGTTTGTGGAGGAAGTTTTGGCCTTAGCTGAAGGGTTACTTCAGCTTGGACTCAAACCTGGTCATGTTGTAGCCATTGCTGCTTACAACAGTGATTGGTATCTGGAGTGGTTATTAGCCATTGCATTTGTAGGAGGAATAGCTGCTCCTCTAAACTATCGCTGGAGTTTTGAAGAGGCAAGATTAGCTATGATTTCTGTGAAGCCAGTGATGTTAGTGATTGATGAGAGCTGCTACACATGGTACTCAAAACTCCACAAAAACAATACTCTATCTCTAAGGTGGTATGTGTTGTTGGATTCAACTTCCCCAGATTTTACAAGAGAGTGGAATGTATTAACACCAGAAATGATTAAGCGGCATTCAACAAATCCTCTACCATTTGTTTACTCATGGGCACCCGAAGGCGCTGTCATAATCTGTTTTACTTCAGGTACTACCGGAAAACCTAAGGGAGTCATACTAAGCCATGGAGCTTTGATCATACAATCCTTAGCAAAGATTGCCATCGTCGGATACAGTGAAGATGATGTTTATCTGCATACTGCTCCATTAGGCCATATCGGTGGATTGTCATCGGCCTTGGCCATGCTAATGGTTGGAGGTTGCCATGTCTTGATACCGAAGTTTGATGCAAAATCAGCCGTTGATGCAATAGAGCAACATAGCGTGACATCTCTAATCACAGTTCCTGCAATAATGGCCAGTCTTATTTCTTTAGTTAGATCCAAAAAGACCTGGAAAGGGGGAGAAACTGTCAAAAGAATACTCAACGGGGGTGGAAGCCTCTCATTTGAGTTCATCAAGGATTCTAGCATATTCTTCCATAAAGCTAAACTTATCTCAGCTTATGGGATGACAGAGGCATGCTCTTCATTGACATTCTTGACCCTCTATGATCCATTGCATAAAACCACCAGCCAGCACCTTCAAATACCAGATGAATCAGGATCCAATTTCATTCACCAACCACAAGGTGTTTGTGTTGGCAAGGCAGCACCCCATGTAGAATTGAAGATATGTGCAGATGATTCGGGTCATAGAGGGAGAATTTTAACTAGAGGACCACATATAATGCTCAGGTATTGGGATCAATCTCTCGTAAAGGCATTAAATCCGAGGAGTGAAGCATGGCTTGACACAGGTGACATTGGATCAATTGATGATGATGGTAATTTGTGGCTCCTTGGACGAACAAATGGGCGTATCAAGAGTGGCGGGGAGAACATTTACCCTGAAGAGGTTGAGGCAATTGTACTAGAACATCCAGGGATTGCAAGCACTGTTATTGTTGGAATACCAGATGCTAGCCTCACAGAGATGGTTGTAGCATGTGTCCAACTAAGAGAAAATTGGCAATGGTCAGAAAAGGCTGTATCAGATGAAGAGTTTCACCTGTCTAGAAAGATTCTCCAGCAATATTGTATCCAAAATAATTTAAGCAGGTTTAAGATACCAAAGGTATTTATTCTATGGAGAAAGCCTTTTCCACTCACTACAACAGGAAAAATAAGAAGAGACCAAGTCCAAAAAGAAGTTATGTCTCAGCTACAATCTCTGCATAGTAATCTTTGA	1686	0.4205	MANKYSEPHICQCLSGLLTSRRYLPVTISGHRRKNGEQFVEEVLALAEGLLQLGLKPGHVVAIAAYNSDWYLEWLLAIAFVGGIAAPLNYRWSFEEARLAMISVKPVMLVIDESCYTWYSKLHKNNTLSLRWYVLLDSTSPDFTREWNVLTPEMIKRHSTNPLPFVYSWAPEGAVIICFTSGTTGKPKGVILSHGALIIQSLAKIAIVGYSEDDVYLHTAPLGHIGGLSSALAMLMVGGCHVLIPKFDAKSAVDAIEQHSVTSLITVPAIMASLISLVRSKKTWKGGETVKRILNGGGSLSFEFIKDSSIFFHKAKLISAYGMTEACSSLTFLTLYDPLHKTTSQHLQIPDESGSNFIHQPQGVCVGKAAPHVELKICADDSGHRGRILTRGPHIMLRYWDQSLVKALNPRSEAWLDTGDIGSIDDDGNLWLLGRTNGRIKSGGENIYPEEVEAIVLEHPGIASTVIVGIPDASLTEMVVACVQLRENWQWSEKAVSDEEFHLSRKILQQYCIQNNLSRFKIPKVFILWRKPFPLTTTGKIRRDQVQKEVMSQLQSLHSNL*	562

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan19g0779	561	Pfam	AMP-binding enzyme C-terminal domain	451	540	IPR025110	-
	Lan19g0779	561	ProSitePatterns	Putative AMP-binding domain signature.	177	188	IPR020845	-
	Lan19g0779	561	Gene3D	-	439	558	IPR045851	-
	Lan19g0779	561	PANTHER	ACYL-COA SYNTHETASE	7	552	-	-
	Lan19g0779	561	SUPERFAMILY	Acetyl-CoA synthetase-like	28	555	-	-
	Lan19g0779	561	Pfam	AMP-binding enzyme	29	442	IPR000873	-
	Lan19g0779	561	CDD	AFD_class_I	177	542	-	-
	Lan19g0779	561	PANTHER	ACYL-COA SYNTHETASE FAMILY MEMBER 2, MITOCHONDRIAL	7	552	-	-
	Lan19g0779	561	Gene3D	-	17	437	IPR042099	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan19g0779	Lan-Chr19	14197096	14202508	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan19g0779	46	469	Monolignol Biosynthesis Gene Families	AT3G21240	29.478	8.57e-39	147

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan19g0779	K14760		-	gmx:100809925	882.093

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