Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0764 ATGACTGATGATACCATGTGTTCTCTGAATGATAAGGGCTTGTCGCTGAGTCCTAATCTCGATATCGCGATACACGTCGGATCCCCAAACGGTGAGCAACTGCTCGAGGTTGAGAATCAGGACAACGGGCTTGAGAATGACTGCGATCAGTTATTTGAGATTGATGGAAGTGAACTTGAAGGTGGCAGGGATGAAACAACAGTAGCTAATAGTCATAGCAGAGAGTCTCAAGGTAAAGACTACCTCCCACCGGTTGTGGGAATGGAGTTTGATACTTATGATGATGCCTACGACTATTATAATAGCTATGCCAAGGAAACTGGATTTGCTATTCGTGTAAAATCTTCTTGGACCAAACGCAACAGCAAGGAGAAGCGTGGTGCTGTGCTTTGCTGCAACTGTGAAGGTTTTAAAACAGTTAAAGAAGCAAATAGTCACAGGAAAGAAACAAGAACTGGCTGTCTAGCAATGATAAGATTGAGATTAGTGGAATCTAACAGGTGGAGGGTGGATGAAGTCAAACTCGAGCATAATCATTCATTTGATCTTGAGAGAGCACAAAACTCTAAATCACATAAGAGGATAGACGGTGGAGCCAAAAGGAAATCCGAGCCAACTGTAGATGTTGAAGTTCGAACGATCAAGTTATATCGAATGCCAGTTGTAGATGCATCAGGGTATGGAAGCTCAAATTCTAATGAAGGAGGAACTGGCAGCAACATAATTTTTTCCCAGAGTTTGAAACTTAAAAACGGTGATGCAGAACTTATTTCAAATTACATGTGTCGCAGTCAACTTATGAATCCCAATTTCTTTTATGTGATGGATCTGAATGATGATGGACAACTGAGGAATATATTTTGGATCGATTCTAGATCAAGGGCTGCATATGGTTATTTTGGTGATGTGGTCGCATTTGATTCAACCTGTATGTCAAACAATTATGAGATTCCACTTGTTGCTTTTGTTGGCGTTAATCACCATGGGCAATCTGTTTTATTAGGATGTGGTCTTCTTGCAGATGAGACATATGAAACATATGTTTGGTTATTTAGGGCATGGCTTACATGCATGTCTGGTCGTCCCCCACAAACTTTTATTACAAACCAGTGTAAGGCCATGCAAAGTGCAATAGCAGACGTTTTCCCGAGAGCTCATCACAGAATTTGTCTATCACAAGTCGTGCAAAGCATTCTGGGATGTTTGGTGCAGTTTCAGGAATATGTAGCATTTCAGACAGGACTGAATAAAGTGATATATAACTCTAAAACAGTAGATGAATTTGAAAGAGATTGGGATGATCTGACCCAGCAGTTTGGAATACGAAATCATGAAAAGCTTCAAACTTGGCATGAGGAACGAGAGCATTGGGCACCAGTTTACTCCAAGGACACATTTTTTGCTGGAATTTCTGATTATGAGAAGGGTGAGTGTGTGGTTCCTTTCTTTAAGGGTCATGTGCATCAACAAACTTCATTGAAAGAATTTTTCGAGATTTATGAGTTAGTTATGCAAAAAAAGCATAAAATTGAAGCTCTTGATGATTTGGAGTCACGAGACTCAAGCCCATTACTGAAGACAAGATACTATTATGAGTTGCAGCTATCTAAGTTGTACACAAATGCAATATTCAGGAAGTTCCAAGATGAGGTGGTGATGATGTCCTCTTGTTTTAGCATCACAGAAATTCAAACAAGTGGTTCTATAGTGACATACATGGTAAAAGAAGGTCAAGGGGAAGAAATCGTGCAAGACGTTACACATTTTGAAGTCATGTACGATAAAGCTGGAGCAGAAGTACGCTGCGTTTGTAGCTGCTTTAACTTCAAAGGCTATCTGTGCAGACATGCCTTGTGTATCCTTAATTACAATGGTGTGGAGGAAATTCCATGTCAGTATATTTTGTCGAGATGGAGGAAGGATTTTACGCGATTTTATGTACCTCAGCTCAGCTCAGATAGTGTTGATATTACCAACCCAGTTCAGTGTTTTGATCATTTGTACAAACGTGCTATGCAAGTTGTTGAAGAAGGGATGGTATCCCAACATCATTATATGCTTGCTTGGCAAACATTTAAGGAGTCTTTGAATAAGATTCGCCTTTTAGAAGACAAGATTGAATGA 2124 0.3992 MTDDTMCSLNDKGLSLSPNLDIAIHVGSPNGEQLLEVENQDNGLENDCDQLFEIDGSELEGGRDETTVANSHSRESQGKDYLPPVVGMEFDTYDDAYDYYNSYAKETGFAIRVKSSWTKRNSKEKRGAVLCCNCEGFKTVKEANSHRKETRTGCLAMIRLRLVESNRWRVDEVKLEHNHSFDLERAQNSKSHKRIDGGAKRKSEPTVDVEVRTIKLYRMPVVDASGYGSSNSNEGGTGSNIIFSQSLKLKNGDAELISNYMCRSQLMNPNFFYVMDLNDDGQLRNIFWIDSRSRAAYGYFGDVVAFDSTCMSNNYEIPLVAFVGVNHHGQSVLLGCGLLADETYETYVWLFRAWLTCMSGRPPQTFITNQCKAMQSAIADVFPRAHHRICLSQVVQSILGCLVQFQEYVAFQTGLNKVIYNSKTVDEFERDWDDLTQQFGIRNHEKLQTWHEEREHWAPVYSKDTFFAGISDYEKGECVVPFFKGHVHQQTSLKEFFEIYELVMQKKHKIEALDDLESRDSSPLLKTRYYYELQLSKLYTNAIFRKFQDEVVMMSSCFSITEIQTSGSIVTYMVKEGQGEEIVQDVTHFEVMYDKAGAEVRCVCSCFNFKGYLCRHALCILNYNGVEEIPCQYILSRWRKDFTRFYVPQLSSDSVDITNPVQCFDHLYKRAMQVVEEGMVSQHHYMLAWQTFKESLNKIRLLEDKIE* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0764 707 ProSiteProfiles Zinc finger SWIM-type profile. 589 625 IPR007527 GO:0008270
Lan19g0764 707 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 31 704 IPR031052 GO:0006355
Lan19g0764 707 MobiDBLite consensus disorder prediction 59 80 - -
Lan19g0764 707 Pfam FAR1 DNA-binding domain 98 181 IPR004330 -
Lan19g0764 707 Pfam MULE transposase domain 303 396 IPR018289 -
Lan19g0764 707 PANTHER PROTEIN FAR1-RELATED SEQUENCE 8 31 704 - -
Lan19g0764 707 SMART 26again6 600 627 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0764 Lan-Chr19 13998407 14002024 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lan19g0764 MULE 4.3e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0764 K17604 - gmx:100796448 1227.23