Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0756 ATGGATGAAATATCTCCGGCGGATAGCGGCGGTGGTGGGAGGGTTTCTTCCGGGAAGGAGCAACAAGCCGCCGGCGTCGGAATCCTTCTTCAGATAATGATGTTAGTCTTGTCCTTCGTTCTAGGTCACGTTCTTCGTCGCAAAAAGATTTACATCATTCCTGAAGCTAGTGCTTCTCTTCTCATTGGTTTAATTGTTGGTATACTAGCTAATATATCAGACACTGAAAATAGCATCAGGGCTTGGTTCAATTTTCATGAGGAATTCTTCTTCCTCTTCCTGTTACCACCCATCATATTTCAGTCTGGGTTTAGTCTAGCACCTAAACCTTTTTTCTCAAATTTTGGAGCAATTGTCACATTTGCTATCTTTGGTACCTTCGTATCTTCAATCGTCACAGGTGTCTTAGTTTATCTTGGTGGCTTGGTCTACCTCATGTATAGACTACCTTTTGTTGAGTGCCTAATGTTTGGTGCTCTTATATCAGCAACTGATCCTGTTACTGTTCTGTCCATATTTCAGGAGCTTGGCACTGATGTCAATCTATATGCCTTGGTTTTTGGAGAATCTGTTTTGAATGATGCAATGGCAATTTCTTTGTACAGGACGATGTCAATGGTTAAAGCTGATCCATCTGGACAAAATTTATTCATGGTGGTTATTAGGTTTTTGGAGACTTTTTTTGGGTCAATGTCGGCAGGTGTTGGAGTCGGATTTACATCTGCTTTACTATTTAAGTATGCAGGATTGGATATTGACAATCTTCAGAATTTGGAGAGCTGTCTATTTGTTCTTTTCCCATATTTCTCGTACATGCTTGCAGAAGGTCTCGGTCTGTCTGGTATTGTATCAATACTGTTCACAGGAATAGTCATGAAGCATTATTCGTATTCAAATTTGTCACAAAGTTCTCAAAGATTTGTCTCCGCATTTTTCGAGTTGATATCATCATTAGCAGAGACATTTGTATTTATATACATGGGGTTTGATATTGCTATGGAGCAGCATAGCTGGTCACATGTTGGATTTATATTCTTCTCGATTATATTCATTGGAATTGCAAGGGCAGCTAATGTCTTCTCTTGTGCTTATCTGGTCAATCTGGTCAGACCTTCACATCGAAAGATACCTTCAAAGCACCAGAATGCACTTTGGTACAGTGGACTTCGAGGGGCAATGGCCTTCGCCCTTGCTCTGCAATCAGTGCATGATCTTCCTGAAGGTCATGGACAGACCATCTTGACTGCAACTACAGCAATAGTTGTTTTGACAGTTCTACTGATCGGTGGTTCTACAGGTACCATGCTGGAAGCTCTAGATGTTGTAGGGGGTGACAGTCATAGCGATAGCCCCTTGGCCTCAGTGGGTACCATTGTGAATTACGAGGAAAACAATGGTTATGTTGCTCCTTCTTATGAAGAAGAGTCATCATCAGGCAGCAAAATCAAGATGAAGCTAAAAGAATTCCACAGGAGTGCCACATCTTTTACTGCATTAGATAAAAACTACCTCACCCCATTCTTTACAAGTCAAAATGGAGATGAAGAAGATGAAGCAGCATTGCCTTTGGCTTCTTCAAGCTCGGAATTTCACGACAATAATCATTATTCATCATGA 1617 0.41 MDEISPADSGGGGRVSSGKEQQAAGVGILLQIMMLVLSFVLGHVLRRKKIYIIPEASASLLIGLIVGILANISDTENSIRAWFNFHEEFFFLFLLPPIIFQSGFSLAPKPFFSNFGAIVTFAIFGTFVSSIVTGVLVYLGGLVYLMYRLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSMVKADPSGQNLFMVVIRFLETFFGSMSAGVGVGFTSALLFKYAGLDIDNLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGIVMKHYSYSNLSQSSQRFVSAFFELISSLAETFVFIYMGFDIAMEQHSWSHVGFIFFSIIFIGIARAANVFSCAYLVNLVRPSHRKIPSKHQNALWYSGLRGAMAFALALQSVHDLPEGHGQTILTATTAIVVLTVLLIGGSTGTMLEALDVVGGDSHSDSPLASVGTIVNYEENNGYVAPSYEEESSSGSKIKMKLKEFHRSATSFTALDKNYLTPFFTSQNGDEEDEAALPLASSSSEFHDNNHYSS* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0756 538 PANTHER SODIUM/HYDROGEN EXCHANGER 6 15 518 - -
Lan19g0756 538 MobiDBLite consensus disorder prediction 509 538 - -
Lan19g0756 538 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 32 446 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lan19g0756 538 PANTHER SODIUM/HYDROGEN EXCHANGER 15 518 IPR018422 GO:0006812|GO:0015299|GO:0016021
Lan19g0756 538 Gene3D - 151 203 - -
Lan19g0756 538 PRINTS Na+/H+ exchanger signature 89 100 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lan19g0756 538 PRINTS Na+/H+ exchanger signature 103 117 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lan19g0756 538 PRINTS Na+/H+ exchanger signature 118 126 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lan19g0756 538 PRINTS Na+/H+ exchanger signature 158 168 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lan19g0756 538 Pfam Sodium/hydrogen exchanger family 34 437 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0756 Lan-Chr19 13946627 13954472 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0756 15 439 Antiporters AT3G05030 33.933 1.93e-52 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0756 K14724 - gmx:100790830 868.996