Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0751 ATGAAACAGAAGAAAAAAATAAAAGTTATTAGAGGAATCAGTGTAGAGAAAACAGAGACACGATTAGAACTGCACAACTCCAAAATTGAAGGCTGCGAAATTTTGTTGGAATTCGTAGATCTGGTTCATGATCAGCAAATAGATTGTGGTGGCAGCACAATGGATCCTGACAATGGAGGAAACAGTATCACCAACAACCCTAATCTCTCCTCAAAACAACGTTTACGTTGGACACATGAGCTACATGAACGCTTTGTGGATGCTGTGGCACAACTCGGTGGACCAGATCGTGCCACACCCAAAGGGGTCCTCAGAGTTATGGGTGTGCAAGGCTTAACAATTTATCACGTCAAAAGTCATTTACAGAAATATCGACTAGCAAAGTACCTACCTGATTCCTCATCCGATGAAGGGAAAAATGCTGAGAAGAAAGAAACCGGGGATGTTCTTTCCAACCTTGATGGTTCATCTGGGATGCAGATTACTGAAGCACTAAAGCTTCAAATGGAGGTGCAGAAGCGACTACATGAACAATTGGAGGTGCAGAGACAGCTTCAACTACGAATCGAAGCTCAAGGTAAATACTTGAAAAAGATAATTGAAGAGCAAAATCGTCTAAGTGGGGTTCTTTCAGATGCACCTGATTCTGTGGTCACAGCTTCAGCTCAAGGAGATATGTGCCAAGAACATGATAACAAGACTGACCCAGCAACCCCTGACCCAGAAAAGGCTGCCAAAGAGCGCTCCCCGGCAAAGAGTCTCTCGATTGAATCTTTTTCATCTCACCATGAACCGTGGACTCCTGATTCCGGCTGCCATGTTGGTGCCCCTGCTGAGAGTCCTAAAGGGGAGAGATCAAGCAAGAAGCAAAGGGTAAGCATGGAAGAAGCAGCATATTCTAAGCAAGACATGGTGCTTCCACATCAGATACTGGAGTCAAGTATGTCTTCATATCAGCATGCAAATACTGTTTTCCTTTGCCAAGAGCAATTTGACCCTTCATTGAGGGGTATATCTGGCAGAAGTGGTGAGGAGTTGGAGAAATAA 1047 0.4413 MKQKKKIKVIRGISVEKTETRLELHNSKIEGCEILLEFVDLVHDQQIDCGGSTMDPDNGGNSITNNPNLSSKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDEGKNAEKKETGDVLSNLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQNRLSGVLSDAPDSVVTASAQGDMCQEHDNKTDPATPDPEKAAKERSPAKSLSIESFSSHHEPWTPDSGCHVGAPAESPKGERSSKKQRVSMEEAAYSKQDMVLPHQILESSMSSYQHANTVFLCQEQFDPSLRGISGRSGEELEK* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0751 348 MobiDBLite consensus disorder prediction 282 296 - -
Lan19g0751 348 Pfam Myb-like DNA-binding domain 75 125 IPR001005 -
Lan19g0751 348 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 39 336 IPR044848 GO:0003700
Lan19g0751 348 Coils Coil 162 182 - -
Lan19g0751 348 MobiDBLite consensus disorder prediction 131 149 - -
Lan19g0751 348 Pfam MYB-CC type transfactor, LHEQLE motif 159 205 IPR025756 -
Lan19g0751 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 129 IPR017930 -
Lan19g0751 348 MobiDBLite consensus disorder prediction 228 250 - -
Lan19g0751 348 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7 39 336 - -
Lan19g0751 348 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 72 127 IPR006447 GO:0003677
Lan19g0751 348 MobiDBLite consensus disorder prediction 131 155 - -
Lan19g0751 348 MobiDBLite consensus disorder prediction 225 303 - -
Lan19g0751 348 Gene3D - 71 130 - -
Lan19g0751 348 SUPERFAMILY Homeodomain-like 70 126 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0751 Lan-Chr19 13921080 13926310 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0751 107 337 G2-like Transcription Factor Family AT2G01060 63.180 3.68e-86 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan19g0751 Myb_DNA-binding 2.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0751 - - lang:109334185 683.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0562 4 8045629 8050145 Lan19g0751 19 13921080 13926310 LSH