Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0734 ATGTGTAGTGGACAAGGTTGTTCCAGTGCCATTAAATCTCATGTTCATTTCTCTTTCCTCATTCACAACATAAACCACAAACATATCTATTGGAGAATAATGAGTGAACAATTGGGATTGTTTAAAGTGATAGTTGTTCAAGGGAAGAGGTTGGTGATAAGGGATTTCAAGAGCAGTGATCCTTATGTTGTGCTCAAAGTAGGAAATCAGACGGCGAAAACCAAGGTCATCAATAGCTGTTTGAATCCTGTTTGGAATGAAGAGCTGAATTTCACTGTGACAGAACCTTTGGGAGTTTTGAATTTGGAAGTATTTGATAAAGATCTTTTGAAGTCTGATGATAAGATGGGAAATGCTTTCCTAAACCTTCAACCATTAGTCTCAGCAGCTAGATTAAGGGATATCTTAAGAGTCTCCTCTGGCGAGACAACAATAAGGAAGGTCATACCCGAAAGTGACAATTGTCTTGTCCGCGAAAGCAGCATCAATTGCGTTAATGGCGAAGTGGTGCAAAATGTTTGGTTAAGGCTTCGCGGAGTTGAGTCCGGTGAGATAGAATTGACAGTAAAGTTGATCACACCTATTGCTCCCTCAAAGTAG 600 0.4 MCSGQGCSSAIKSHVHFSFLIHNINHKHIYWRIMSEQLGLFKVIVVQGKRLVIRDFKSSDPYVVLKVGNQTAKTKVINSCLNPVWNEELNFTVTEPLGVLNLEVFDKDLLKSDDKMGNAFLNLQPLVSAARLRDILRVSSGETTIRKVIPESDNCLVRESSINCVNGEVVQNVWLRLRGVESGEIELTVKLITPIAPSK* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0734 199 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 34 195 IPR044562 -
Lan19g0734 199 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 36 192 IPR035892 -
Lan19g0734 199 Gene3D C2 domain 35 195 IPR035892 -
Lan19g0734 199 CDD C2_ArfGAP 38 183 - -
Lan19g0734 199 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 11 34 195 - -
Lan19g0734 199 PRINTS C2 domain signature 55 67 IPR000008 -
Lan19g0734 199 PRINTS C2 domain signature 79 92 IPR000008 -
Lan19g0734 199 PRINTS C2 domain signature 100 108 IPR000008 -
Lan19g0734 199 SMART C2_3c 40 135 IPR000008 -
Lan19g0734 199 Pfam C2 domain 40 132 IPR000008 -
Lan19g0734 199 ProSiteProfiles C2 domain profile. 25 136 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0734 Lan-Chr19 13756678 13759546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0734 8 192 C2H2 Transcription Factor Family AT4G05330 40.541 9.90e-39 134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0547 4 7950712 7953798 Lan19g0734 19 13756678 13759546 LSH