Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0728 ATGTCTGAGGAGATTGCACCTATTTTTGTGTCATGGGAGGAGCAAGTGATATGTCCGGAGCGTGGGAACCGTGTGACTCATTTTTACTTGAAGGATGCATTTGGGAATTCGGTGCTTGCTGTTGTTGGGACTGAGAGGAGTGTGAGGCACATGGTGTATATTGTACCTGACCATTTTTTGCAGACTTATGGATCTAATGAGTCCATCAATGCAGTCAAATGGAGGGCGAGGAGAGAGGTTGTCGACTGGCTAACTTGTTTGACCTTGCAGAACCTTCCATGTCGTGCAAGTGATCAGGTGGATGGTTCAGGACAAGCTGTAGAATCTCTCGGTCTATTGAAAGCTGGAATCCATGCTAATAAAAAGCTTTTACCTGCTAAAGTGATTTCAAGGAAATTGAAATTTCAAAGGTCAGATATTGAGTGGTCTGGCATTGCTTGGTTTTGTCACAAACAGCTGAAGCACTACCCAGGGTTTTGCAGGAATGGGACAACCATAAATGTTCATTCGTTTGTACATATCATGGCTCAAGAAGAAAGACCCTATCTTGGTTATGTGGAAGATATGTATGAAGACAAGAAGAAGCAGAGAAAGGTGAAGGTACGGTGGTTTCACCATGGTCAGGAAGTTAAGCATATGATTCCAGAGCTGAATCTGCAAGATGGAGAGGTTTTCATCACACCTCATGTTCAGGTTATCAGTGCAGAATGTATCAATGGTCCTGCAACAGTTCTGACTGCCCAAGATTATGAGAAATACCTGGCTTGTATGCCACATACCTCTTTATATGAGGTCCATATGTGCTCTAGGCAGTTTAAAAACAACAAGCATAAGCCCTTCTCACTTACTAAGTTGCATGGATATAGTAACCAACCCGTGCTTTCTTGTTTGTATAGTCCTATCCTCTCCAAGAGAAAGGCTGATTGTCTTAAACCGCTCATGGAGGATGACGAGAACTTCACTCAAGATGATCCTTTATTGTCCAGCAGTAAGAGGAAGAGAAGTTCTAAGGGGCATCAAGTGCTTGAAAAGTGTTATCCTGATCTGAAAAACTCTGCTCCTTTGAATGAGATGACAAAATGTGAACCAAAATACCCAAGTTTGAAATTAAAACTATCAAGAAAAACAATGGGTATTAATGTTATTGGATCCAAGCCTCAGTGTGAACCGCCTTTTAAGGTAGATGAAATGATAGAGGTTCTTTGCCAAGATAGTGGCATTAGAGGCTGCTGGTTTAGGTGTAAAATCTTGACTGCTTCTCAGAATCGACTGAAGGTCCGGTATGATGATGTGCTGGATGTAGATGGACTAGAGAAATTAGAGGAATGGGTCCGTGCATTTAAAGTGGCAGCTCCTGACAAACTGGGTATGCGAAGTTCAGGCCGCTTAACAGTACGACCATGCCCTCCTGAAGATACAACAGATCATATTTTTGAGATTGGAGCAGCAGTGGATGCCTGGTGGAGTGATGGATGGTGGGAAGGTGTCGTAACTGCAGTCAATTTTTGTGGAGTTGGAGTCCTGCTGGTTTATTCCCCTGGCGAAGATAAGTTCCTAACGGTCGAGAAGAAGAACATTCGGATTTCTCGAGATTGGGTTGGTAACAAGTGGGTTGATATACCAGGAAAGCCTAACATTTACAGCTATATATCTTCAAATGTCAGTTCCAGCATCAGACTGTCAGCTAATTCTGCCATGATAGATGGATCCATATCTAATTTCGAAAGTAAACCATTGTCAGATCCCAAAGTCGAAGTTGCTGAAAAGGTTGAGCAAGAATTGTCTGTTTTGGAAGCACCTGATGACCCAGTGGAAAGTAGGAAGGGAATGACCACGAAGCCACTCCATGCCATTCGTGAAGACAAAGATTATAACTCTAATGGTGGCTGTGATCGTGACAATGGCAATGTTGATGCTGATATGAAGCTACTCCATGCCATTCATGAAGAAGACAAGGATAATAATTCTGGTGCTGGTAGTGAAGGTGACCCTGACAATGACGGGGGTCGTCGTGGTGGCAATGACGGCATTCAAGAGACAACTGAGGAAAATTTGAAGGAGGAAACTCTTGCTTCTGCTGAACCAAAACTTGATGCAGCAGAAGCAATACAAGTTGCATGA 2121 0.4309 MSEEIAPIFVSWEEQVICPERGNRVTHFYLKDAFGNSVLAVVGTERSVRHMVYIVPDHFLQTYGSNESINAVKWRARREVVDWLTCLTLQNLPCRASDQVDGSGQAVESLGLLKAGIHANKKLLPAKVISRKLKFQRSDIEWSGIAWFCHKQLKHYPGFCRNGTTINVHSFVHIMAQEERPYLGYVEDMYEDKKKQRKVKVRWFHHGQEVKHMIPELNLQDGEVFITPHVQVISAECINGPATVLTAQDYEKYLACMPHTSLYEVHMCSRQFKNNKHKPFSLTKLHGYSNQPVLSCLYSPILSKRKADCLKPLMEDDENFTQDDPLLSSSKRKRSSKGHQVLEKCYPDLKNSAPLNEMTKCEPKYPSLKLKLSRKTMGINVIGSKPQCEPPFKVDEMIEVLCQDSGIRGCWFRCKILTASQNRLKVRYDDVLDVDGLEKLEEWVRAFKVAAPDKLGMRSSGRLTVRPCPPEDTTDHIFEIGAAVDAWWSDGWWEGVVTAVNFCGVGVLLVYSPGEDKFLTVEKKNIRISRDWVGNKWVDIPGKPNIYSYISSNVSSSIRLSANSAMIDGSISNFESKPLSDPKVEVAEKVEQELSVLEAPDDPVESRKGMTTKPLHAIREDKDYNSNGGCDRDNGNVDADMKLLHAIHEEDKDNNSGAGSEGDPDNDGGRRGGNDGIQETTEENLKEETLASAEPKLDAAEAIQVA* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0728 706 Gene3D - 131 296 IPR043151 -
Lan19g0728 706 MobiDBLite consensus disorder prediction 594 628 - -
Lan19g0728 706 Pfam BAH domain 166 275 IPR001025 GO:0003682
Lan19g0728 706 SMART BAH_4 164 283 IPR001025 GO:0003682
Lan19g0728 706 MobiDBLite consensus disorder prediction 635 694 - -
Lan19g0728 706 MobiDBLite consensus disorder prediction 594 706 - -
Lan19g0728 706 SMART agenet_At_2 476 534 IPR014002 -
Lan19g0728 706 SMART agenet_At_2 390 455 IPR014002 -
Lan19g0728 706 PANTHER BROMO ADJACENT-LIKE DOMAIN PROTEIN 8 588 - -
Lan19g0728 706 ProSiteProfiles BAH domain profile. 164 283 IPR001025 GO:0003682
Lan19g0728 706 Pfam Agenet domain 396 470 IPR008395 -
Lan19g0728 706 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 8 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0728 Lan-Chr19 13630118 13636301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0728 404 532 PHD Transcription Factor Family AT5G58610 29.323 6.22e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0728 - - gmx:100816046 925.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0535 4 7872547 7879123 Lan19g0728 19 13630118 13636301 LSH