Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0726 ATGTGCAAGGATTTTGATCTATGTATAGAGTGTTTCTCTGTTGGAGCTGAGTTAACACCCCACAAAAGCAATCACCCTTACAGGGTTATGGAAAACTTGTCTTTCCCTCTTCTTTGTCCAGACTGGAATTTAGAGGATGAAATTCTGCTTATAGAGGGGATTGAATTGCATGGCTTGGGAAAGTGGACAGAAGTTGCTGAGCATGTTGGGACAAAGAACAAAGAATCATGCTTAGAACACTATAACAATGTGTACTTGAACTCTCCAATCTTTCCTCTTCCGGACATGTCTCATATTGCTGGGAAAAACAGAGAAGAACTTCTTGCCATGGCAAAATGGCAGGGTAAAGACAAGAAAGATACTCAAGTAGAGTGTAATTTTGGAGGAAAGAAGCCAAGTTCCCCTGAAAATGAAGGTGCTTCCTTAGTAGAATCAAGTGGTTATAATCCAAAAAGGCAAGAATTTAATCCTGAATATGATAATGACGCTGAACAACTACTCGCTGAAATGGAATTTGACGATGCTGATACGGAGGAAGAGCGAGAGCTGAAACTACGTGTATTGCGTATCTATTCAAAAAGGCTTGATGAAAGGAAATGTAGAAAGGATTTCATACTTGAGAGAAATTTATCAAACCCAAAACCATTTGAAGAAGATTTAACACCCGAGGAGAAGACAGTGTGTCAAAAATATGACGTATTCATGCGATTTCATACGAAAGAAGAGCACAAAGAGTTGCTTAGAATAATTATCTTGGAACATAGAACTCGTAAAAGACTTCAAGAACTTCAGGAAGCGCGGACTGCTGGTTGCCTCAATTCAGCAGAAGCCGATATATATCTGGCACACAAGAGAAGAGAGGCTGAAGAAAGTGCTCCTAGTGCAGAAAAAATGGATGTAGCATCATATTGTGAAGCGGATTTACTTTCTGAACCTGAGAAACGTTTATGCTGTGAGCTAAGGTTACTTCCAGCTATATATTTAAAGATGCAAGAGCAACTTTCTCTACAAATACTTTCTGGCATTGTTTCATCAAAATCAGATGCTCATCAATTATTCCAAATGGACCCTATGAAAATTGACAGGGTTTATGATATGCTCATCAAAAAGGGAATTGGCTCAGCATGA 1128 0.3901 MCKDFDLCIECFSVGAELTPHKSNHPYRVMENLSFPLLCPDWNLEDEILLIEGIELHGLGKWTEVAEHVGTKNKESCLEHYNNVYLNSPIFPLPDMSHIAGKNREELLAMAKWQGKDKKDTQVECNFGGKKPSSPENEGASLVESSGYNPKRQEFNPEYDNDAEQLLAEMEFDDADTEEERELKLRVLRIYSKRLDERKCRKDFILERNLSNPKPFEEDLTPEEKTVCQKYDVFMRFHTKEEHKELLRIIILEHRTRKRLQELQEARTAGCLNSAEADIYLAHKRREAEESAPSAEKMDVASYCEADLLSEPEKRLCCELRLLPAIYLKMQEQLSLQILSGIVSSKSDAHQLFQMDPMKIDRVYDMLIKKGIGSA* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0726 375 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 293 374 - -
Lan19g0726 375 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 1 293 - -
Lan19g0726 375 MobiDBLite consensus disorder prediction 128 156 - -
Lan19g0726 375 Gene3D - 37 87 - -
Lan19g0726 375 SUPERFAMILY Homeodomain-like 296 372 IPR009057 -
Lan19g0726 375 SMART sant 38 87 IPR001005 -
Lan19g0726 375 CDD ZZ_ADA2 2 30 IPR041983 -
Lan19g0726 375 CDD SANT 42 84 IPR001005 -
Lan19g0726 375 SUPERFAMILY RING/U-box 2 43 - -
Lan19g0726 375 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 42 89 IPR017930 -
Lan19g0726 375 ProSiteProfiles SANT domain profile. 37 89 IPR017884 -
Lan19g0726 375 ProSiteProfiles SWIRM domain profile. 289 375 IPR007526 GO:0005515
Lan19g0726 375 Gene3D - 288 373 IPR036388 -
Lan19g0726 375 Pfam Myb-like DNA-binding domain 41 84 IPR001005 -
Lan19g0726 375 PIRSF Txn_adaptor_ADA2 1 303 IPR016827 GO:0003713|GO:0006357|GO:0035065
Lan19g0726 375 PIRSF Txn_adaptor_ADA2 289 375 IPR016827 GO:0003713|GO:0006357|GO:0035065
Lan19g0726 375 MobiDBLite consensus disorder prediction 138 152 - -
Lan19g0726 375 ProSiteProfiles Zinc finger ZZ-type profile. 1 35 IPR000433 GO:0008270
Lan19g0726 375 ProSiteProfiles Myb-like domain profile. 42 85 IPR001005 -
Lan19g0726 375 PANTHER TRANSCRIPTIONAL ADAPTER ADA2B 1 293 IPR034318 GO:0003713|GO:0006357|GO:0035065
Lan19g0726 375 PANTHER TRANSCRIPTIONAL ADAPTER ADA2B 293 374 IPR034318 GO:0003713|GO:0006357|GO:0035065
Lan19g0726 375 SUPERFAMILY Homeodomain-like 35 88 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0726 Lan-Chr19 13617472 13620008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0726 1 375 EF-hand Containing Proteins AT3G07740 40.825 4.24e-113 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan19g0726 Myb_DNA-binding 5.8e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0726 K11314 - cit:102617027 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0534 4 7869273 7871711 Lan19g0726 19 13617472 13620008 LSH