Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0722 ATGCAAACATCTCGGAAACACGATACCTCACCCGGCTTCAGTTTATACCACCAGCCTGTGCATGGCATTGATCCCAACACAAGTTGCCAAATACTACAAAGCAATTCAAGCCATGATGTCGACGGTAGCAGCAGCCAAGGAACCATTGTTTCTTTTGAGACCTTAAAGGAGCAGTACTTTACCCTCGAATCATCTCCAGCAATCAATGGTCTCATTGGTTGTGATTCTCCTTCCTATGCTAGTGTATCATCCAATAGGAGTCCCTTTTCTTCACAAGGTTCTCAATCATACAATTCAGATCAGCACCAGTCATCTAACAACACCTATGGATCACCAATAAGTGTGTACTCTAGTGCCGATGATGACTATGAATTGAAGCACAAACTTAGAGAACTCGAGATTTCGTTGTTGGGGCCTGAACCGGATATTGTCAACAGTTTTCATTGCTGCTTCAAGGGTGACCTTCAAAGAGGACCTCAAATAGATAAATATAATTGGCTTCTTATTGCGGAAATGATTCCGAAGTTAGACTTGAAAGAAGTCCTGGTTCTATGCGCAAGAGCCGTGTCGGATGAAGATTTTCAAACAGCAATAGGGTGGATGGATAATGTGTTAGTGAAGATGGTATCTGTTGCTGGGGAACCCATCCAGAGGTTAGGTGCTTACATGTTGGAGGGTCTTAGAGCTAGATTGGAATCATCAGGGAGCTTAATCTACAAAGCCTTGAAGTGTGAACAACCAACAAGCAAAGATCTAATGACTTACATGCATATCCTGTATCAGATTTGCCCGTATTTTAAGTTCGCTTACATATCGGCGAATGTTGTAATCGGAGAAGCAATGCAAAATGAATCAAGGATTCATATAATTGACTTCCAAATTGCACAGGGCACACAGTGGATGTTACTCATGCAAGCTCTTGCATCTAGGCCTGGTGGTCCTCCATTTCTTCGAGTTACTGGCGTCGATGATTCCCAATCATTTCATGCTAGGGGTGGGGGACTTGACATTGTAGGGAAACGGCTCTCAGATTATGCCAAGTCTTGTGGAGTGCCATTTGAGTTCCATAGTGCCGCCATGTGTGGCAGTGAGGTTGAACTAGAAAACCTTGTAGTTCGACCCGGTGAAGCACTGGCTGTAAACTTCCCTTATGTTTTGCACCATATGCCGGATGAGAGTGTGAGCACGGAGAACCATAGAGACAGGCTGTTGAGATTGGTGAAGAGCTTGTCACCAAAGGTTGTGACCCTTGTTGAGCAAGAATCCAACACCAACACTTCTCCCTTTTTCCATAGGTTTGTCGAGACCCTAGATTACTACACCGCCATGTTTGAGTCCATAGACGTGGCTCGCCGCAGAGACGATAAGCAAAGGATCAGTGCCGAACAGCACTGTGTGGCTCGAGACATCGTCAACATGATAGCTTGTGAGGGGGCTGAGAGGGTGGAAAGGCATGAACCTTTTGGAAAGTGGAGGTCAAGATTTTCAATGGCTGGATTTGCACCATATCCATTGAGTTCCTCAAATATGGATGCAGTTAGAAATATGTTGAATGAATTCAATGAAAATTATAGGCTTGCACATAGAGATGGTGTTCTTTATCTTGGATGGAAGAATAGACCTATGTCTACCTCATCTGCATGGATATGTAACTGA 1656 0.4414 MQTSRKHDTSPGFSLYHQPVHGIDPNTSCQILQSNSSHDVDGSSSQGTIVSFETLKEQYFTLESSPAINGLIGCDSPSYASVSSNRSPFSSQGSQSYNSDQHQSSNNTYGSPISVYSSADDDYELKHKLRELEISLLGPEPDIVNSFHCCFKGDLQRGPQIDKYNWLLIAEMIPKLDLKEVLVLCARAVSDEDFQTAIGWMDNVLVKMVSVAGEPIQRLGAYMLEGLRARLESSGSLIYKALKCEQPTSKDLMTYMHILYQICPYFKFAYISANVVIGEAMQNESRIHIIDFQIAQGTQWMLLMQALASRPGGPPFLRVTGVDDSQSFHARGGGLDIVGKRLSDYAKSCGVPFEFHSAAMCGSEVELENLVVRPGEALAVNFPYVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFHRFVETLDYYTAMFESIDVARRRDDKQRISAEQHCVARDIVNMIACEGAERVERHEPFGKWRSRFSMAGFAPYPLSSSNMDAVRNMLNEFNENYRLAHRDGVLYLGWKNRPMSTSSAWICN* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0722 551 Pfam GRAS domain family 178 548 IPR005202 -
Lan19g0722 551 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 22 548 - -
Lan19g0722 551 MobiDBLite consensus disorder prediction 83 111 - -
Lan19g0722 551 ProSiteProfiles GRAS family profile. 169 549 IPR005202 -
Lan19g0722 551 MobiDBLite consensus disorder prediction 27 46 - -
Lan19g0722 551 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 22 548 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0722 Lan-Chr19 13549046 13552310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0722 1 551 GRAS Transcription Factor Family AT4G17230 60.217 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan19g0722 GRAS 1.8e-127 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0722 - - gmx:100819190 900.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0528 4 7831094 7834808 Lan19g0722 19 13549046 13552310 LSH
Lan12g1343 12 18962233 18963989 Lan19g0722 19 13549046 13552310 PCT