Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0684 ATGAATGCTGAAGCTAAGAACTCTCTCAAAGAAAAACCAACTCAAACCATGTCATCTTCTTCTTCTTCTTCTCCTTCTTTTAGCAATGTTTTTGGAAACTCTTCAAACCCACTCGAGGTGAGACGTAGAGGAAGGCCTCTTGGTTCATATAAGAAGCTTCCTGAGTTAACAGCTCCAATGGTTAGGGCTTACAATCGAGCAAAAATGCCTAGGTTTCGTTGGACCCCAGAACTTCACCATTGTTTCGTTCATGCAGTTCAAACTCTTGGAGGAGTAGAAAGAGCCACACCAAAGATGATTTTCGAAATGATGAATGTGGCGGAGATTACTTTAAATCATATTAAAAGCCACCTTCAGCATTACAGGACCATGAAGCTCGAGCAGCAGATTAATGAAGGAATTCCCAGCGATGGCCAGCAGCATATTCAGCAGTTAAGCAGTGAATCTGATCATTCTGTGGAAGAACTTGCTCGTATCCAAGCTCAATGCTATCATCATCAGCTGGAGTGTTACAATGAAAACCAAAGGAGATCAGTTTTAATTAATGAAGAAGAAAATAAGACTCACAACTACATTATCTTTAAGGATATTCTCGGAAGCCAGAGCGCCCAAGAGAACCAGAATCCTCTTGAAATGGAGCCACTAGGTGCTGCGATTGGCGAGAGAGACGATGAAGACATGTTGTCCCTATCATTAGGCTTAAGTGGCTTGAATAATCAGAACCCAAGGCCAGATGCAAATGATGTCTGTCTTGAGCTCAAGCTCAATTAA 771 0.4189 MNAEAKNSLKEKPTQTMSSSSSSSPSFSNVFGNSSNPLEVRRRGRPLGSYKKLPELTAPMVRAYNRAKMPRFRWTPELHHCFVHAVQTLGGVERATPKMIFEMMNVAEITLNHIKSHLQHYRTMKLEQQINEGIPSDGQQHIQQLSSESDHSVEELARIQAQCYHHQLECYNENQRRSVLINEEENKTHNYIIFKDILGSQSAQENQNPLEMEPLGAAIGERDDEDMLSLSLGLSGLNNQNPRPDANDVCLELKLN* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0684 256 SUPERFAMILY Homeodomain-like 69 123 IPR009057 -
Lan19g0684 256 MobiDBLite consensus disorder prediction 1 46 - -
Lan19g0684 256 MobiDBLite consensus disorder prediction 1 36 - -
Lan19g0684 256 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 11 191 IPR044848 GO:0003700
Lan19g0684 256 Coils Coil 142 162 - -
Lan19g0684 256 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 70 124 IPR006447 GO:0003677
Lan19g0684 256 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 11 191 - -
Lan19g0684 256 Gene3D - 69 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0684 Lan-Chr19 12895755 12901634 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0684 61 134 G2-like Transcription Factor Family AT2G42660 56.757 1.70e-24 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan19g0684 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0684 - - lang:109334099 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0684 19 12895755 12901634 Lan16g0385 16 3766981 3771543 LSH