LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan19g0683	ATGGCTGAGGTTACACAACCTAATGCTGAGTTGTTGGAATGGGCAAAGAAAGATAAGCGCCGATTCCTGCATGCTGTATACCGTGTTGGTGATCTTGATCGCACAATCAAGTTTTATACTGAAGCTTTTGGAATGAAGCTTTTGAGGAAAAGAGATGTCCCAGAGGAGAAATATGCCAATGCTTTTCTTGGATTTGGCACTGAACAAACACATTTTGTCGTGGAATTAACATATAATTATGGTGTGAGCTCATATGATATTGGTACTGGCTTTGGACATTTTGCTATCGCAACTCCAGATGTTTACAAATTCGTTGAAGACGTCCGGGCTAAGGGTGGAAATGTCACCAGGGAGCCTGGTCCAGTTAAGGGTGGATCATCTGTTATTGCCTTTGTGAAAGACCCTGATGGTTACATTTTTGAGATCATTCAAAGAGCTTCAACCCCCGAGCCATTGTGTCAAGTAATGCTCCGTGTTGGTGACTTAGAGCGCTCAATTAAGTTTTATGAAAAGGCCTTGGGTTTGAAGCTGGTGAAGAAGGTGGATAGACCTGAATACAAGTACACTATAGCTATGCTTGGGTATGCAGAGGAGCACGAGACAATTGTGTTGGAGTTGACATATAACTATGGAGTCACTGAATACACCAAGGGAAATGCTTATGCACAGGTTGCTATTGGTACTGATGATGTATACAAGAGTGCTGAGGTACTCAACGTAGTTACACAAGAGCTTGGAGGAAAGATTACTCGGCAACCAGGGCCAATTCCTGGGATCAACACAAAGATCACTTCTTTCTTAGATCCAGATGGATGGAAAACTGTCTTGGTTGACAATGAAGATTTTCTAAAGGAACTGGAGTGA	864	0.4248	MAEVTQPNAELLEWAKKDKRRFLHAVYRVGDLDRTIKFYTEAFGMKLLRKRDVPEEKYANAFLGFGTEQTHFVVELTYNYGVSSYDIGTGFGHFAIATPDVYKFVEDVRAKGGNVTREPGPVKGGSSVIAFVKDPDGYIFEIIQRASTPEPLCQVMLRVGDLERSIKFYEKALGLKLVKKVDRPEYKYTIAMLGYAEEHETIVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAEVLNVVTQELGGKITRQPGPIPGINTKITSFLDPDGWKTVLVDNEDFLKELE*	288

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan19g0683	287	Gene3D	-	1	147	IPR029068	-
	Lan19g0683	287	ProSiteProfiles	Vicinal oxygen chelate (VOC) domain profile.	151	279	IPR037523	-
	Lan19g0683	287	ProSitePatterns	Glyoxalase I signature 1.	154	175	IPR018146	GO:0004462\|GO:0046872
	Lan19g0683	287	Gene3D	-	148	287	IPR029068	-
	Lan19g0683	287	PANTHER	LACTOYLGLUTATHIONE LYASE	11	287	-	-
	Lan19g0683	287	SUPERFAMILY	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	20	148	IPR029068	-
	Lan19g0683	287	ProSiteProfiles	Vicinal oxygen chelate (VOC) domain profile.	21	145	IPR037523	-
	Lan19g0683	287	Pfam	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	23	142	IPR004360	-
	Lan19g0683	287	Pfam	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	154	273	IPR004360	-
	Lan19g0683	287	TIGRFAM	glyox_I: lactoylglutathione lyase	9	154	IPR004361	GO:0004462\|GO:0046872
	Lan19g0683	287	TIGRFAM	glyox_I: lactoylglutathione lyase	152	282	IPR004361	GO:0004462\|GO:0046872
	Lan19g0683	287	SUPERFAMILY	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	152	278	IPR029068	-
	Lan19g0683	287	ProSitePatterns	Glyoxalase I signature 2.	88	100	IPR018146	GO:0004462\|GO:0046872
	Lan19g0683	287	PANTHER	LACTOYLGLUTATHIONE LYASE-LIKE PROTEIN	11	287	-	-
	Lan19g0683	287	CDD	GlxI_Ni	23	143	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan19g0683	Lan-Chr19	12881196	12885272	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan19g0683	154	278	Calmodulin-binding Proteins	AT1G08110	27.333	1.65e-11	61.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan19g0683	K01759		-	gmx:100799447	546.584