Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0657 ATGACCATGATAGTGAAGGAGAACCCTGTAGGTACTGAACTAGCAATGAGTAATGCTAACGTGGAAGAGGAAATAGATTTTTCCTGTGATCCATACATCGGGTTGGAGTTTGATTCATCAGATGATGCACTTAAGTTTTACACATCATATGCAAATCGAACAGGATTTAAAGTTCGGATCGGTCAGCTGTATCGGTCAAGAACTGATGGTTCGGTTTCTTCTCGAAGGTTCGTGTGCTCGAAGGAGGGATGTCAACTCAGTTCAAGAACAGGTTGTCCAGCATTCATAAGGGTACAGTTAAATGCTTCGGAAAAGTGGGTCGTTGATCATTTCCACAAGGACCACAATCACAATCTTGATACCGAAAGTGAAAATTGCATGCCAACATCACATCAGAGGGGTGCTACAGCTATCAGTTCTTTTGCTGAAGTGCTCCGCAGGCCAAAGAAGAAATTGATTACAAAATCCAATGAACCTTCTCCTCCCTTCGGAATTATTGATTTCAAGCGTCTGAGAAAGGAAGAATTGGAAGGACAGTCCATGACCGAACCATATGTTGGTCAAGAGTTCAGTTCGCCTAATGAAGCCTACCAATTGTATCATACATATGCAGCAGATGTGGGTTTTGGAGTTCGAATTGGTCAATTGTTTCGTTCTAAGAATGATGGGTTGATCACATCCCGTCGATTTGTGTGCTCAAAAGAGGGGTTCCAACACCCTTCAAGAGTAGGTTGTGGAGCTTATTTGAGGATTAAAAGACAACCATCAGGAAAGTGGGTAGTAGACCGTCTCCGAAAAGATCATAATCATAACCTGGACTCTGAAAAGGACAGTAAGGCAAATAGTTTTCCTGCTCCTAACATTTTGACTGAGGAGGTACATGCTGGATCAGCAGATGGTCACTTGTTTAAGATAGATAACTACTCTGTCACTAGAGGAGTTAGACAAAATCACATCAAAAGTGATTGGTTCAGTGTGCTTTTAGAGTATTTCCAATCAAGACAAGCAGAAGATACAGGATTCTTTTATGCCATGGAAGTTGATAATGGTAATTGCATGAGCATATTTTGGGCTGATGGCAGGTCTAGATATTCATGTAGTCAATTTGGCGATGTCCTTGTTGTTGACACATCATACCGAAAAAGTGTCTATTTGGCACCATTTGCTACTTTCGTTGGAGTTAACCATCATAAACAACCTGTGCTTCTTGGTTGTGCTCTAATTGCTGATGAATCGGAAGAATCTTTCACTTGGTTGTTTCAAACATGGCTGAGGGCGGCATCTGGCCGGCAGCCGTTGTCAGTAATAGCTGATCAAGACATTGCAATCCAGAGAGCAATAGCAAAAGTCTTTCCAGGAACCTCTCATCGCTTTTCATTGTGGCAAATTAAGGCAAAGGAACAAGAGAACGAGAGTCTTTTTGGTGATGAATTTACAACAGATTATGAAAAATGTGTTTACCAGAGTCAGACAGTTGAAGAATTTGACACAAGATGGAATGCCCTACTGAACAAATATGGATTGATGGACAATGCTTGGCTAAAAGAAATGTATGAGAAGCGTGCGTCCTGGGTTCCATTATATTTAAAGGGCATGTTTTTTGCAGGCATACCCATGAATGAAAGCGTTGAATCATTTTTTGGTGCACTTTTGAATGCCCAAACACCTCTCATGGATTTCATTCCAAGGTATGAAAGAGGTCTTGAGCGACGCCGTGAGGATGAAAGAAAAGAGGATTTTAATACTTCTAATTTTCAACCTTTTTTGCAAACAAAAGAACCAGTAGAAGAACAATGTAGAAGGCTTTACACTCTTACCTTATTCAAAGTATTTCATAAAGAGCTTTTGCAGTGCTATAGCTATCTTGGGTTTAAAATTTATGAAGAAGGCCCCCTCAGCAGATACTTGGTGCGCAAGGGCGGAAATGATATGGAGAAGCATATCGTTACATTTAATGCATCCAATGTCATTGTTAGTTGTAGCTGTCAGATGTTTGAATATGAAGGTGTTCTTTGTAGACATGCTTTGAGGGTTTTGCAGATACTGGAGTTAAGAGAAGTTCCTTCTCGCTACATCTTACACCGTTGGACAAGAAACGCCGAGGATGGTGCTTTTCCTGACACAGAGTCATTGAGTAGTTCTCAAGAAGTCAGGAATTTGATGCTATGGAGTCTAAGAGAAACTGCATCTAAATATGTAGATGCTGGTGCATCATCTATTGAGAAGTATAAACTTGCCTATGATATTTTGCGGGAGGGTGGTAGAAAGCTATGTTGGCACAGGTGA 2286 0.4086 MTMIVKENPVGTELAMSNANVEEEIDFSCDPYIGLEFDSSDDALKFYTSYANRTGFKVRIGQLYRSRTDGSVSSRRFVCSKEGCQLSSRTGCPAFIRVQLNASEKWVVDHFHKDHNHNLDTESENCMPTSHQRGATAISSFAEVLRRPKKKLITKSNEPSPPFGIIDFKRLRKEELEGQSMTEPYVGQEFSSPNEAYQLYHTYAADVGFGVRIGQLFRSKNDGLITSRRFVCSKEGFQHPSRVGCGAYLRIKRQPSGKWVVDRLRKDHNHNLDSEKDSKANSFPAPNILTEEVHAGSADGHLFKIDNYSVTRGVRQNHIKSDWFSVLLEYFQSRQAEDTGFFYAMEVDNGNCMSIFWADGRSRYSCSQFGDVLVVDTSYRKSVYLAPFATFVGVNHHKQPVLLGCALIADESEESFTWLFQTWLRAASGRQPLSVIADQDIAIQRAIAKVFPGTSHRFSLWQIKAKEQENESLFGDEFTTDYEKCVYQSQTVEEFDTRWNALLNKYGLMDNAWLKEMYEKRASWVPLYLKGMFFAGIPMNESVESFFGALLNAQTPLMDFIPRYERGLERRREDERKEDFNTSNFQPFLQTKEPVEEQCRRLYTLTLFKVFHKELLQCYSYLGFKIYEEGPLSRYLVRKGGNDMEKHIVTFNASNVIVSCSCQMFEYEGVLCRHALRVLQILELREVPSRYILHRWTRNAEDGAFPDTESLSSSQEVRNLMLWSLRETASKYVDAGASSIEKYKLAYDILREGGRKLCWHR* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0657 761 Pfam MULE transposase domain 372 465 IPR018289 -
Lan19g0657 761 Pfam SWIM zinc finger 643 680 IPR007527 GO:0008270
Lan19g0657 761 ProSiteProfiles Zinc finger SWIM-type profile. 647 683 IPR007527 GO:0008270
Lan19g0657 761 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-RELATED 25 124 - -
Lan19g0657 761 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-RELATED 147 757 - -
Lan19g0657 761 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 25 124 IPR031052 GO:0006355
Lan19g0657 761 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 147 757 IPR031052 GO:0006355
Lan19g0657 761 SMART 26again6 658 685 IPR006564 GO:0008270
Lan19g0657 761 Pfam FAR1 DNA-binding domain 45 120 IPR004330 -
Lan19g0657 761 Pfam FAR1 DNA-binding domain 199 272 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0657 Lan-Chr19 12427968 12431067 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lan19g0657 MULE 4.3e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0657 - - lang:109345299 1374.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0379 4 6040364 6045160 Lan19g0657 19 12427968 12431067 LSH