Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0647 ATGGATTGCAATAAAGAAGAGGCCTTAAGGGCCAGCGGTATGGCTGAAAAGAAGATGAAAAGCAAGGATTTTGCAGGGGCTCGTAAACTTGCCCTTAAAGCTAAGCAACTATATCCTGATTTGGAGAATATCAGTCAAATTCTTATTGTTTGTGATGTGCATTGCGCTGCCGAACATAAATTGAATGGCAATGTGATGGACTGGTATAAAATTCTTCAAATTGAGTTGACAGCTAATGACACGACAATTAAGAAACAATACAGGAAGTTTGCTCTCCAACTTCATCCTGACAAAAACCAGTTTCCGGGTGCAGAAGCTGCATTTAAGCTGATTGGGGAAGCTCAAAGAGTGCTTTTGGATAGCTTAAGCCGATCTAGGTTTGATGACATGTATCGCAGGGTTACAATGACCAGGAATGCTACACCATCTTATAATGTGCAGAAGGTTCAGATGAATTTTAATCCTGCGGTGCAAAGGAGTGTCAGGCCGGTATTTACAAACTTGAATCCTCAGCAACACCAACAGCCTAGACAGTCATCTCAGCAGGGTGGCCTTAATGGTGGCCGCCCTACGTTTTGGACTGCCTGCACTTTTTGCTACTTTAGATATGAGTATTACAGGGAAGTTTTAAATAGATCTCTTCGTTGTCAGAATTGCAATAAGCCATTCATTGCATATGATGTGGATATGCAAGGTACATTTCCAGCAACTAATTCAACTCCACAAGCTTTTGACCATCGGAAATATGGCGTGAATCAAGTTACTTCCAATGCAGGTGTTGGATCTCAAGGTAATTTGAGCACAAAGAAGACCAATGCACAGCCTTCTGAGGAAAAAGGCTCTACTATTGACACCTCCAGAAAGCCAAATGGAAAGAGAAGGAGGAAGCGGGGAGAAGAATCCAGTGAATCTTCTGATTCTATAGACAGCACGGAATCTGAAAACGATACGTTTGCCGACAAAGGTAATTTTCCTGGTGTAGAAAAGTTTTCATCTAATAGAGAAGAGAACCCGCGTAGATCTACACGGCAAAAGCATCAGGTTTCTTACAAGGAGAATGTGAGTGACGATGATGATGACTCATTAAAACCTTCGAAAAGGAGCAAGGGGAGCAGATCATCATCTGACGCTGATGAAAGTTGTGCGCAGGCAGCTAATGTCAATTATCAGTATGGTTCAGCTGCTGATACGAAAGATGGTCAGAAAGAGGTCAAGTGTAAACATTCTGAAGAGAGCTTAGTAAATGGAGATGTGAAAATTAAAGAGACAAGGGGAAAAGAAGCAGTGGATGACTCAAAGACTGATAAAGCTTCGGAGAGTACTTCTTTTGTCTTTCCTGATCCCGAGTTCAATGACTTTGAGAAGAAAGAAGAGTGCTTTGAGGTTGGGCAGATTTGGGCTATCTTTGACACAGCTGATGGCATGCCTAGATTCTATGCTATAATCAGAAAAGTTTTCTCTAATGGATTCAAGGTGCGGATAACATGGTTTGAAGCTGATCCGGATGAAGATGATGAAATCCACTGGTTTAATGAGCAATTGCCAATTGCTTGTGGGAAATTTAAACTTGGTGCCTCTGACACCACTAAAGATCATCTGATGTTCTCTCATTTGATTTGTTGTGAAAGGATTGGCCGCTCTACTTTTAAAGTGTATCCAAGAAAGGGAGAAACTTGGGCCCTTTTTAAAAATTGGGATATCAAATGGTACATGGATGCCAAATCTCATCAGCAGTATGATTATGAATTTGTTCAGATTTTGTCAGATTATGTTGAAGGTGAAGGCGTAGTCGTTGCATACTTGGCCAAGTTGAAAGATTTTGTGAGTCTCTTCTCTCGAATTATGAAGGAAGGCAAACACTCAGTTCAAATTCCATCAGCGGAGTTATTCAGATTCTCTCACAGGGTTCATTCATTTAAAATGACTGGTGAGGAAAGGCTAGGTGTTCCTGTAGGATCTTATGAACTTGATCCTGCATCCTTGCCTCAGAATCTGGAAGAGATTGTTGTTCCTGAAGATGTGGAACTGAAGGCCGGTCATAATCCGTCAGTTGGGATGAGTACAAAACCTGAGAGAGATGCATCTACTTCCAAGGTGGAGATTGTGATGGGACTTGAGGAGGAATTTGGTATCAGTGTTGGAGAAGAAAGTGCTCAGACCATCACCACAGTTCAAGAAGCTGCTGATTTGATTGATAAGCTTCTTGAAAGCAAGTAA 2217 0.4154 MDCNKEEALRASGMAEKKMKSKDFAGARKLALKAKQLYPDLENISQILIVCDVHCAAEHKLNGNVMDWYKILQIELTANDTTIKKQYRKFALQLHPDKNQFPGAEAAFKLIGEAQRVLLDSLSRSRFDDMYRRVTMTRNATPSYNVQKVQMNFNPAVQRSVRPVFTNLNPQQHQQPRQSSQQGGLNGGRPTFWTACTFCYFRYEYYREVLNRSLRCQNCNKPFIAYDVDMQGTFPATNSTPQAFDHRKYGVNQVTSNAGVGSQGNLSTKKTNAQPSEEKGSTIDTSRKPNGKRRRKRGEESSESSDSIDSTESENDTFADKGNFPGVEKFSSNREENPRRSTRQKHQVSYKENVSDDDDDSLKPSKRSKGSRSSSDADESCAQAANVNYQYGSAADTKDGQKEVKCKHSEESLVNGDVKIKETRGKEAVDDSKTDKASESTSFVFPDPEFNDFEKKEECFEVGQIWAIFDTADGMPRFYAIIRKVFSNGFKVRITWFEADPDEDDEIHWFNEQLPIACGKFKLGASDTTKDHLMFSHLICCERIGRSTFKVYPRKGETWALFKNWDIKWYMDAKSHQQYDYEFVQILSDYVEGEGVVVAYLAKLKDFVSLFSRIMKEGKHSVQIPSAELFRFSHRVHSFKMTGEERLGVPVGSYELDPASLPQNLEEIVVPEDVELKAGHNPSVGMSTKPERDASTSKVEIVMGLEEEFGISVGEESAQTITTVQEAADLIDKLLESK* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0647 738 PANTHER - 1 695 - -
Lan19g0647 738 Pfam Domain of unknown function (DUF3444) 441 645 IPR024593 -
Lan19g0647 738 SMART dnaj_3 66 123 IPR001623 -
Lan19g0647 738 SUPERFAMILY Chaperone J-domain 64 132 IPR036869 -
Lan19g0647 738 Pfam DnaJ domain 67 128 IPR001623 -
Lan19g0647 738 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Lan19g0647 738 MobiDBLite consensus disorder prediction 255 380 - -
Lan19g0647 738 CDD DnaJ 67 120 IPR001623 -
Lan19g0647 738 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lan19g0647 738 PRINTS DnaJ domain signature 87 102 IPR001623 -
Lan19g0647 738 PRINTS DnaJ domain signature 103 123 IPR001623 -
Lan19g0647 738 Gene3D DnaJ domain 65 181 IPR036869 -
Lan19g0647 738 MobiDBLite consensus disorder prediction 332 374 - -
Lan19g0647 738 Gene3D - 694 738 IPR036736 -
Lan19g0647 738 SUPERFAMILY ACP-like 695 737 IPR036736 -
Lan19g0647 738 MobiDBLite consensus disorder prediction 255 280 - -
Lan19g0647 738 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0647 Lan-Chr19 12231040 12235818 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0647 4 228 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.931 9.96e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0647 - - lang:109334336 1410.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g0028 1 143024 150234 Lan19g0647 19 12231040 12235818 PCT
Lan19g0647 19 12231040 12235818 Lan1g0028 1 143024 150234 PCT