Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0638 ATGGCAAATTGGTGGGCTGGGAATGTTGGTGGTATGAGACAAACAGATTCAATTTCATCATCTCCATCACTTCAGCTGAGAAGAGAGCAAGAATTCATGGACAACACCAACACCAACATCAACAATTCTCCTCCAACCAATAGCAGTAACAGCAATACTAACCCAAACACAACGGAGGATGATGAAAGCCGAGACACCGGTCTCGAAGGCGGCGATGATCAGAACCCCGTTAATCAGGACGATGGTAATCCCGGCAGCAGTAGCCGGAGGCCCCGTGGAAGGCCACCGGGGTCAAAGAATAAGCCCAAACCACCAATTGTGATTACCAAAGAGAGTCCCAACGCCCTGCGAAGCCACGTGTTGGAAATCAGTAGTGGTAGTGATGTGGTTGAGACAATTGCCACCTTTGCTAATCGCCGTCACCGAGGCGTGTCGGTGCTGAGCGGGAGTGGCATTGTCACCAATGTCACTCTCGGGCAACCGACCGCTCCCGGTGGGGTTATAACCCTTAATGGGAGGTTTGAGATTTTGACTCTATCGGGCGCGTTTTTGCCTGCTCCTTCCCCTCCCGGGGCTACACGGCTGACCGTGTACTTAGCCGGTGGTCAAGGACAAGTGGTTGGTGGAACCGTGGTGGGTTCGTTGGTGGCGTCGGGGCCTGTGATGGTAATTGCTGCTACGTTTGCTAATGCTACTTATGAGAGATTGCCACTAGAGGATGAGCAAGGCGAGGAGGAGATGCAAGTGCAGCATCAACAACAGCAACATCAGCAATCAATAGTGAGTTCAACTGGAACTGGTGGAACTCCTGCATCTCAAGGTTTGGGTGAACAGGTTTCAATGTCAATGCCAATGCCAATGTTTAACTTGCCTCCAAATTTGGTACACAATGGTCAATTGCCTCATGATGTGTTCTGGGGACCTCAACAACCTCGTCCTCCAACTTCTTACTGA 954 0.5094 MANWWAGNVGGMRQTDSISSSPSLQLRREQEFMDNTNTNINNSPPTNSSNSNTNPNTTEDDESRDTGLEGGDDQNPVNQDDGNPGSSSRRPRGRPPGSKNKPKPPIVITKESPNALRSHVLEISSGSDVVETIATFANRRHRGVSVLSGSGIVTNVTLGQPTAPGGVITLNGRFEILTLSGAFLPAPSPPGATRLTVYLAGGQGQVVGGTVVGSLVASGPVMVIAATFANATYERLPLEDEQGEEEMQVQHQQQQHQQSIVSSTGTGGTPASQGLGEQVSMSMPMPMFNLPPNLVHNGQLPHDVFWGPQQPRPPTSY* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0638 317 MobiDBLite consensus disorder prediction 10 57 - -
Lan19g0638 317 SUPERFAMILY AF0104/ALDC/Ptd012-like 113 241 - -
Lan19g0638 317 MobiDBLite consensus disorder prediction 1 111 - -
Lan19g0638 317 Pfam Plants and Prokaryotes Conserved (PCC) domain 117 229 IPR005175 -
Lan19g0638 317 MobiDBLite consensus disorder prediction 240 277 - -
Lan19g0638 317 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 7 317 IPR014476 GO:0003680
Lan19g0638 317 MobiDBLite consensus disorder prediction 72 86 - -
Lan19g0638 317 ProSiteProfiles PPC domain profile profile. 113 250 IPR005175 -
Lan19g0638 317 MobiDBLite consensus disorder prediction 248 277 - -
Lan19g0638 317 PIRSF ESCAROLA 29 316 IPR014476 GO:0003680
Lan19g0638 317 Gene3D - 116 258 - -
Lan19g0638 317 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 7 317 - -
Lan19g0638 317 CDD DUF296 117 192 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0638 Lan-Chr19 12092900 12094644 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0638 89 314 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 60.000 2.28e-70 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0638 - - qsu:112039774 337.806