Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0632 ATGGACAAAGATGATGAGATTCAAGCACAGGCATGTAAGTTTCCAAGAATTGGAAATGGCTCAAACAAGTTAGGTTCCACAAGAGGGAATGAAGAAGATGGTAGCAATTGGAACAATTCTTCAAGAATTGTAAGGGTATCTAGAGCATCTGGTGGAAAAGATAGGCACAGCAAGGTTATGACTTCAAAAGGGTTAAGAGACAGAAGAGTTAGGCTTTCTGTGACCACAGCAATTCAGTTCTATGACCTTCAAGATAGACTTGGTTTTGAGCAACCTAGTAAAGCTGTTGAGTGGTTAATCAATGCTGCTTCAGATTCTATTTCAGAACTTCCTTCTCTTAACACAACTTTCCCTGATACCCCTAATCAACCAAGTGATGAGAAAAGGCCTAGTTTTGATGAAGTAGATGTAGACACAAACAACTATCACCAAAACCAAAACCAGAAACTTTCTTTGTCCAAATCTGCTTGTAGCAGCACTTCTGAGACAAGCAAAGGTTCTGGCTTATCTTTATCAAGGCCTGAGATTTGTGTCAAAGCAAGGGAAGGAGGAACAAAGGATAAAGAGAAAGAATATGAGTCATCTCATCACATTACAAATCATCATCACAATGTGAGTCAAACTGCTTCTTTCACTGAACTTCTCACTGGTGGGTTTGGTAATGTTCCTACTACTACAAGTGCTAATGCTAGTGATGAGTGTAATCTATTCAACAAGGCAAAACAATGGTCACCTATGGTTATGGACTACTTCAACAATAATACCCTTATGGTAGGGCCATCATCCTCTTCAAGAAATGTTTCACTTTCACCATTTAGTGATGAAAACCATTCAGTTCAGCTTCAACATTTCTCTTTCATTCCTGACCATAATTTCATACCTTGTTCTCAGCCAAGTGAAAATCTCAACTTCACAATCTCTCCAACCCTTGCTGGTTATAATAGGGGGACCCTTCAGTCCAATTCTCAACCTCATCTTATGCATCCTATGCAGAGGTTTTCTTCACCTATAGATGGATCAAACAATAATCTACCTTTCTTCATAGGAGGTTCTTCTGCTCATTCAGCTTCTGCTGCATCAACCATGGATACTGGTAGTAACCATCATCAACAACTTCAATTCTCACCTTTGTTTGATGGAAGCTTGCAACTCTGCTATGGAGATGGAACTCAGCATTCAGAACAGAAGGGAAAAGCTAAGAACTGA 1206 0.3955 MDKDDEIQAQACKFPRIGNGSNKLGSTRGNEEDGSNWNNSSRIVRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGFEQPSKAVEWLINAASDSISELPSLNTTFPDTPNQPSDEKRPSFDEVDVDTNNYHQNQNQKLSLSKSACSSTSETSKGSGLSLSRPEICVKAREGGTKDKEKEYESSHHITNHHHNVSQTASFTELLTGGFGNVPTTTSANASDECNLFNKAKQWSPMVMDYFNNNTLMVGPSSSSRNVSLSPFSDENHSVQLQHFSFIPDHNFIPCSQPSENLNFTISPTLAGYNRGTLQSNSQPHLMHPMQRFSSPIDGSNNNLPFFIGGSSAHSASAASTMDTGSNHHQQLQFSPLFDGSLQLCYGDGTQHSEQKGKAKN* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0632 401 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 401 IPR005333 GO:0003700
Lan19g0632 401 MobiDBLite consensus disorder prediction 1 41 - -
Lan19g0632 401 MobiDBLite consensus disorder prediction 20 41 - -
Lan19g0632 401 MobiDBLite consensus disorder prediction 109 170 - -
Lan19g0632 401 PANTHER TRANSCRIPTION FACTOR TCP24 1 401 - -
Lan19g0632 401 MobiDBLite consensus disorder prediction 137 170 - -
Lan19g0632 401 Pfam TCP family transcription factor 51 190 IPR017887 -
Lan19g0632 401 ProSiteProfiles TCP domain profile. 52 110 IPR017887 -
Lan19g0632 401 MobiDBLite consensus disorder prediction 109 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0632 Lan-Chr19 11931707 11940785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0632 35 401 TCP Transcription Factor Family AT4G18390 42.118 3.15e-64 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lan19g0632 TCP 6.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0632 - - lang:109333568 770.385