Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0624 ATGCCGGAGATTGAACATGCTGCGGCTGCAGAGGAGGAAACCGCCCTGTTCGGAAAATACGAGCTGGGTCGTCTTCTTGGATGCGGCGCATTCGCGAAAGTGTACTACGCGCGGAACGTGAAAACTGGTCAGAGCGTGGCGGTGAAGATAATCAACAAGAAGAGACTCGCCGGAACAGGCCTCGCCGGAAACGTGAAGCGTGAGATCACGATCATGAGCAAGCTCCACCATCCCCACATCGTGCGCCTCCACGAGGTTCTCGCCACAAAAACCAAGATCTTCTTCGTAATCGAACTCGTACGCGGTGGCGAACTTTTCGCGAAAATTTCAAAGGGTCGATTCAGCGAAGAACTCAGCCGTCGATATTTTCATCAGTTAATCTCAGCCATTGGTTACTGCCACTCACGTGGCGTGTTCCATCGTGATTTGAAACCAGAGAATCTCTTACTTGATGAGAATGGCAATTTAAAAGTTTCGGATTTCGGGTTAAGTGCGGTTCGGGATCAGATCCGACCCGATGGGTTGCTCCATACCCTTTGCGGAACACCCGCTTACGTGGCACCTGAGATTTTAGCGAAGAAAGGTTACGATGGCGCGAAAGTTGACGTGTGGTCATGCGGCGTCGTTTTATTCGTTCTTGCAGCTGGGTACTTACCGTTTAATGATCCTCAATTGATGGTTATGTATAAAAAGATTTATAAAGGGGACTTTCGGTGTCCACGTTGGATGTCGCAGGAGCTTCGACGATTTCTGTCGAAACTCCTGGATACTAACCCGGATACTCGTATCACTTTAGATGCAATGGTACGAGATCCATGGTTTAGAAAAGGGTACAAGGAGGTTAAGTTTCATGAAGAGGATTATGGTGGAGAGTTGTGGTCAAAGGGTGATAGGTCAGAGAAGGCAGTGAATTTGAATGCGTTTGATATTATATCGTTTTCTTCCGGGTTGGACTTGTCGGGGATGTTTCATCAGATGAATGGCGGAGAGAGGTTGGTGTTGGAGGGGTTGCCGGAGAAGGTGGTGGAGTTGATGGAGGAGGTGGCGGTGGCGGAGGGGTTGGCGGTGAGGTGGAAGAATGAATGTGGTGTTGAGCTGGAAGGGTTGAATGGTAATTTTAGAATTGGGGTTGAGGTTTACCGGTTAACGGAGGAGCTGGTGGTGGTTGAGGTTAACCGGAGAGGCTGCGATGCTGTGGCTTTTAAAGAAGCGTGGGAGAATAAGATTAAGGCTAAGCTATTATGCTCTCCCAGCGTTTCTACGACATCGCTTACTGAGTCACCTGAGCTGAAGGTTGCCGGTGACTAA 1308 0.4931 MPEIEHAAAAEEETALFGKYELGRLLGCGAFAKVYYARNVKTGQSVAVKIINKKRLAGTGLAGNVKREITIMSKLHHPHIVRLHEVLATKTKIFFVIELVRGGELFAKISKGRFSEELSRRYFHQLISAIGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVRDQIRPDGLLHTLCGTPAYVAPEILAKKGYDGAKVDVWSCGVVLFVLAAGYLPFNDPQLMVMYKKIYKGDFRCPRWMSQELRRFLSKLLDTNPDTRITLDAMVRDPWFRKGYKEVKFHEEDYGGELWSKGDRSEKAVNLNAFDIISFSSGLDLSGMFHQMNGGERLVLEGLPEKVVELMEEVAVAEGLAVRWKNECGVELEGLNGNFRIGVEVYRLTEELVVVEVNRRGCDAVAFKEAWENKIKAKLLCSPSVSTTSLTESPELKVAGD* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0624 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Lan19g0624 435 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Lan19g0624 435 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0624 435 Gene3D Kinase associated domain 1, KA1 306 415 - -
Lan19g0624 435 ProSiteProfiles NAF domain profile. 300 324 IPR018451 GO:0007165
Lan19g0624 435 SUPERFAMILY Protein kinase-like (PK-like) 17 282 IPR011009 -
Lan19g0624 435 PANTHER - 1 422 - -
Lan19g0624 435 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0624 435 Pfam Protein kinase domain 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0624 435 Pfam NAF domain 304 357 IPR004041 GO:0007165
Lan19g0624 435 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 422 - -
Lan19g0624 435 Gene3D Transferase(Phosphotransferase) domain 1 10 305 - -
Lan19g0624 435 CDD CIPK_C 306 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0624 Lan-Chr19 11713178 11714745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0624 1 423 CBL-interacting serine-threonine protein kinases AT2G30360 63.073 0.0 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lan19g0624 Pkinase 5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0624 - K12761 gmx:100799169 659.062