LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan19g0624	ATGCCGGAGATTGAACATGCTGCGGCTGCAGAGGAGGAAACCGCCCTGTTCGGAAAATACGAGCTGGGTCGTCTTCTTGGATGCGGCGCATTCGCGAAAGTGTACTACGCGCGGAACGTGAAAACTGGTCAGAGCGTGGCGGTGAAGATAATCAACAAGAAGAGACTCGCCGGAACAGGCCTCGCCGGAAACGTGAAGCGTGAGATCACGATCATGAGCAAGCTCCACCATCCCCACATCGTGCGCCTCCACGAGGTTCTCGCCACAAAAACCAAGATCTTCTTCGTAATCGAACTCGTACGCGGTGGCGAACTTTTCGCGAAAATTTCAAAGGGTCGATTCAGCGAAGAACTCAGCCGTCGATATTTTCATCAGTTAATCTCAGCCATTGGTTACTGCCACTCACGTGGCGTGTTCCATCGTGATTTGAAACCAGAGAATCTCTTACTTGATGAGAATGGCAATTTAAAAGTTTCGGATTTCGGGTTAAGTGCGGTTCGGGATCAGATCCGACCCGATGGGTTGCTCCATACCCTTTGCGGAACACCCGCTTACGTGGCACCTGAGATTTTAGCGAAGAAAGGTTACGATGGCGCGAAAGTTGACGTGTGGTCATGCGGCGTCGTTTTATTCGTTCTTGCAGCTGGGTACTTACCGTTTAATGATCCTCAATTGATGGTTATGTATAAAAAGATTTATAAAGGGGACTTTCGGTGTCCACGTTGGATGTCGCAGGAGCTTCGACGATTTCTGTCGAAACTCCTGGATACTAACCCGGATACTCGTATCACTTTAGATGCAATGGTACGAGATCCATGGTTTAGAAAAGGGTACAAGGAGGTTAAGTTTCATGAAGAGGATTATGGTGGAGAGTTGTGGTCAAAGGGTGATAGGTCAGAGAAGGCAGTGAATTTGAATGCGTTTGATATTATATCGTTTTCTTCCGGGTTGGACTTGTCGGGGATGTTTCATCAGATGAATGGCGGAGAGAGGTTGGTGTTGGAGGGGTTGCCGGAGAAGGTGGTGGAGTTGATGGAGGAGGTGGCGGTGGCGGAGGGGTTGGCGGTGAGGTGGAAGAATGAATGTGGTGTTGAGCTGGAAGGGTTGAATGGTAATTTTAGAATTGGGGTTGAGGTTTACCGGTTAACGGAGGAGCTGGTGGTGGTTGAGGTTAACCGGAGAGGCTGCGATGCTGTGGCTTTTAAAGAAGCGTGGGAGAATAAGATTAAGGCTAAGCTATTATGCTCTCCCAGCGTTTCTACGACATCGCTTACTGAGTCACCTGAGCTGAAGGTTGCCGGTGACTAA	1308	0.4931	MPEIEHAAAAEEETALFGKYELGRLLGCGAFAKVYYARNVKTGQSVAVKIINKKRLAGTGLAGNVKREITIMSKLHHPHIVRLHEVLATKTKIFFVIELVRGGELFAKISKGRFSEELSRRYFHQLISAIGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVRDQIRPDGLLHTLCGTPAYVAPEILAKKGYDGAKVDVWSCGVVLFVLAAGYLPFNDPQLMVMYKKIYKGDFRCPRWMSQELRRFLSKLLDTNPDTRITLDAMVRDPWFRKGYKEVKFHEEDYGGELWSKGDRSEKAVNLNAFDIISFSSGLDLSGMFHQMNGGERLVLEGLPEKVVELMEEVAVAEGLAVRWKNECGVELEGLNGNFRIGVEVYRLTEELVVVEVNRRGCDAVAFKEAWENKIKAKLLCSPSVSTTSLTESPELKVAGD*	436

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Lan19g0624	435	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	138	150	IPR008271	GO:0004672\|GO:0006468
Lan19g0624	435	ProSitePatterns	Protein kinases ATP-binding region signature.	26	49	IPR017441	GO:0005524
Lan19g0624	435	ProSiteProfiles	Protein kinase domain profile.	20	274	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Lan19g0624	435	Gene3D	Kinase associated domain 1, KA1	306	415	-	-
Lan19g0624	435	ProSiteProfiles	NAF domain profile.	300	324	IPR018451	GO:0007165
Lan19g0624	435	SUPERFAMILY	Protein kinase-like (PK-like)	17	282	IPR011009	-
Lan19g0624	435	PANTHER	-	1	422	-	-
Lan19g0624	435	SMART	serkin_6	20	274	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Lan19g0624	435	Pfam	Protein kinase domain	20	274	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Lan19g0624	435	Pfam	NAF domain	304	357	IPR004041	GO:0007165

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan19g0624	Lan-Chr19	11713178	11714745	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan19g0624	1	423	CBL-interacting serine-threonine protein kinases	AT2G30360	63.073	0.0	544

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_CAMKL-CHK1	Lan19g0624		Pkinase	5e-70	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan19g0624	-		K12761	gmx:100799169	659.062

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