LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan19g0618	ATGGCTGGTTCTGTAGCAGAAAGTGGCCAGGATAAGAAGAAGAGATTTGCCCTTCTCGGCGTCTCTTCGATCCTTCTTGTTGCTATGGTTGGTGCGGTGGCCATTGGTTTAACCCGAAGTGGAAGTCCAGAACATGGTGATACCGAGATCTCGAGCTCTCAGAAGAATGCAGAGGTGCTCTGCCAATCAACACAATACAAAGATACTTGCATCAAAAGCCTGGATAAGGCGTCGAATACTACCGATGTCAAAGAGCTTGTGAAAATGGCCTTCAATTCCACAGCTGAGGAGTTGTTAAGCAAAATTAACAACTCCACACTTTTGAAAGAGTTGGCTAAGGATAACATGACCAAACAGGCTTTGGATATATGCAAGGAAGTGTTTGATTACGCAATTGATGACATTCAGAAATCAATTAACTCATTGGACAATTTTGAAGTCAGCAAGCTAAGCCAATATGCCTATGAACTTAAGGTTTGGCTTGCAGGTACACTCTCACACCAACAAACATGTTTGGATGGATTCGAGAACTCGAAAACAAAAGGTGCCGAGACAATGAAAAAGGCCTTAAACACATCAATTGAGATGAGTAGCAATGCTGTTGATCTCATCAATGCTGCATCTGAACTCCTCAAGGATTTCAACTTGAACTCCTCTGAGCTTAGCACAATTGCTAGCAGGAGGCTTCTCTCCGATGAAGAAGAACAACAGCAACAACAACAAAAACAACAACAGCAACAACAACAACAACAAGAACCACTTGTTGATGGTTTTCCTTCATGGGCGAGTGAAGGACAAAGGAGTCTTCTTCAGGCTGCACCTGGTGGTGGAGGCGGAATTAAGGCTAACGCGGTCGTGGCTCAAGATGGGAGTGGACAGTTCAAAACCCTCACTGATGCTCTCAACACTGTTCCTAAGAAGAATGCTTTGCCTTTTGTGATTCATGTGAAGGAGGGTGTGTACAAGGAGTATGTTTCTGTGCTCAAGCATATGACCAATGTCACAATCATTGGAGATGGTCCTACAAAGACCATATTCTCTGGCGGCAAAAATTACAAGGATGGTGTCCAAACTTACAAGACTGCAACATTTGGTGTTAATGCTGCTATGTTCACTGCCAAGGATATCGGGTTTGAGAACACAGCAGGATCAGAGAGGCACCAAGCTGTGGCACTCAGGGTAACAGCAGACCAAGCAGTGTTCCACAACTGCAAAATGGACGGGTTCCAAGACACTCTCTACGTGCAATCGAAGCGCCAATTCTACCGTGACTGCACCATCTCAGGCACAATTGACTTCATATTCGGCGACGCGGTCGCAGTGTTCCAGAACTGCAAACTAGTGGTAAGAAAGCCCTTAGACAACCAACAATGTATGGTTACAGCAGGGGGAAGGTCCAAACTTGAAAGCCCAAGTGGCCTAATATTCCAAAACTGTCACTTCACAAGTGAGCCAGAAGTAGCTACCTTGAACCCAAAGATATCATACTTGGGAAGGCCATGGAGAATTTACTCTAGGGTAGTAATCATGGATTCTACAATTGATGACATTTTTGTTCCACAAGGGTATATGCCATGGATGGGAAGTGCATTTACTGATACATGTACCTATTATGAGTACAATAACAAAGGTGGTGGTGGTAACACTGCATCAAGAGTGAAATGGCCTGGTGTTAAGACCATAACATCTGCTGAAGCTGCTGTTTTCTATCCAGGGAAATTCTTTGAGATTGCTAACTCAACTCAACGTGATTCTTGGATTGTTAGCTCTGGTGTGCCATATTCACTAGGCCCTATTCCAAGTGGAGGGGTAAAGCCGATATGA	1824	0.443	MAGSVAESGQDKKKRFALLGVSSILLVAMVGAVAIGLTRSGSPEHGDTEISSSQKNAEVLCQSTQYKDTCIKSLDKASNTTDVKELVKMAFNSTAEELLSKINNSTLLKELAKDNMTKQALDICKEVFDYAIDDIQKSINSLDNFEVSKLSQYAYELKVWLAGTLSHQQTCLDGFENSKTKGAETMKKALNTSIEMSSNAVDLINAASELLKDFNLNSSELSTIASRRLLSDEEEQQQQQQKQQQQQQQQQEPLVDGFPSWASEGQRSLLQAAPGGGGGIKANAVVAQDGSGQFKTLTDALNTVPKKNALPFVIHVKEGVYKEYVSVLKHMTNVTIIGDGPTKTIFSGGKNYKDGVQTYKTATFGVNAAMFTAKDIGFENTAGSERHQAVALRVTADQAVFHNCKMDGFQDTLYVQSKRQFYRDCTISGTIDFIFGDAVAVFQNCKLVVRKPLDNQQCMVTAGGRSKLESPSGLIFQNCHFTSEPEVATLNPKISYLGRPWRIYSRVVIMDSTIDDIFVPQGYMPWMGSAFTDTCTYYEYNNKGGGGNTASRVKWPGVKTITSAEAAVFYPGKFFEIANSTQRDSWIVSSGVPYSLGPIPSGGVKPI*	608

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Lan19g0618	607	Gene3D	Invertase/pectin methylesterase inhibitor family protein	53	207	IPR035513	-
Lan19g0618	607	Pfam	Plant invertase/pectin methylesterase inhibitor	60	202	IPR006501	GO:0004857
Lan19g0618	607	MobiDBLite	consensus disorder prediction	236	256	-	-
Lan19g0618	607	SUPERFAMILY	Pectin lyase-like	280	596	IPR011050	-
Lan19g0618	607	Pfam	Pectinesterase	283	575	IPR000070	GO:0030599\|GO:0042545
Lan19g0618	607	CDD	PMEI-like_3	60	208	-	-
Lan19g0618	607	Coils	Coil	227	252	-	-
Lan19g0618	607	PANTHER	PECTINESTERASE	8	601	-	-
Lan19g0618	607	ProSitePatterns	Pectinesterase signature 2.	427	436	IPR033131	-
Lan19g0618	607	TIGRFAM	PME_inhib: pectinesterase inhibitor domain	51	205	IPR006501	GO:0004857

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan19g0618	Lan-Chr19	11588187	11591296	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan19g0618	12	597	Carbohydrate Esterase	AT3G05610	44.746	0.0	529

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan19g0618	K01051		-	gmx:100784682	773.467

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan12g0873	12	15806746	15809452	Lan19g0618	19	11588187	11591296	PCT
	Lan19g0618	19	11588187	11591296	Lan12g0873	12	15806746	15809452	PCT

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