Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0611 ATGCACCCTTCTTTTGCCATTATTGTAGGATGCATTGCTGGAATGATACTCCTATTCATCACCAAGGGGAAAAGTTCTCGCATTCTTACCTTTGATGAAGAAGTATTCTTCATATATCTCCTTCCTCCAATAATATTCAATGCTGGGTTTCAGGTGAAGAAGAAACAATTCTTCCACAACTTTTTAACCATCATGTTGTTCGGGGTGATTGGTGTTTTCGTTTCTACAGCTGTTATTACTTGCGGCAGCCGGTTTCTGTTTCCCAAGTTGAACTTCCTTGGCCTGAGTGGGCAAGAATATCTTGCTATTGGAACAATTTTCTCATCAACAGACACAGTTTGTACACTGCAGGTTCTCCATCAAGATGAAACTCCTTTACTATACAGCCTAGTCTTCGGGGAAGGAGTGGTAAATGATGCAACATCGGTTGTTCTCTTCAACGCTGTGCAAAAGATCGATCTTTCAAGACTTGATGGCAGGGTGTTCCAAGTTCTTGGAGATTTCTTGTATCTATTCTCAACAAGCACTGCTCTTGGAGTTGTAGCTGGACTTCTAACAGCATATCTCTTGAAAGCCTTAAGCTTTGGCAGACATTCAAGCATTCGCGAAATTGCATTGATGATGTTAATGGCATACCTATCCTACATGTTGTCAGAGCTATTTGATCTAAGTGGAATTCTCACTGTTTTCTTTTGTGGAGTACTAATGTCACATTATGCATGGCATAATGTGACTGAAATTTCAAGAGTCACAACTAGGCACCTGTTTGCAGCAATATCATTTATTGCAGAAACCTTCATATTTCTTTATGTGGGCATGGATGCCCTTGACATTGAAAAGTGGAGGATGACAAAATTAAGTTTAGGAAGCTTGATTGGAATTTACAGTAGCTTAATCTTATTGATCTTACTTGGAAGGGCTGCATTTGTTTTCCCTCTCTCTTCTCTTTCGAATTATATGAATAGGCGTGCTGACCGAACATCGAAAATCACATTCAAACATCAGATAGTCATTTGGTGGGCTGGACTAATGAGGGGAGCAGTCTCCATCGCTCTGGCTTTCAAACAGTTTACATTTTCTGGGGTTACTTCTGATCCAGTCAATGCAACAATGGTTACCAACACCATTATTGTTGTCCTTTTCAGCACGCTGGTGTTTGGTTTTCTTACAAAACCACTAATTAGATATCTGCTTCCTCACCATGCAACAAGGAAAAACAATGGGCATGAAGAATCAGGTCCACACCCAGAGGACATGAATCTACCTTTCCTATCCCTTGAGGAGTCAACAGAAACCAACCTTAGCCGTGCAAAGGAAAGTTTGTCCATGTTTATAGAAAGTCCTGTGTATACCATGCATTACTATTGGAGGAGTTTTGATGATTCCTACATGAGACCTATATTTGGGGGACCTCGTGCTAACTTTCACAATGCTAATACAGCAAATCATGGACATTTGAGTAATGTGGTTTGA 1473 0.4039 MHPSFAIIVGCIAGMILLFITKGKSSRILTFDEEVFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMLFGVIGVFVSTAVITCGSRFLFPKLNFLGLSGQEYLAIGTIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKIDLSRLDGRVFQVLGDFLYLFSTSTALGVVAGLLTAYLLKALSFGRHSSIREIALMMLMAYLSYMLSELFDLSGILTVFFCGVLMSHYAWHNVTEISRVTTRHLFAAISFIAETFIFLYVGMDALDIEKWRMTKLSLGSLIGIYSSLILLILLGRAAFVFPLSSLSNYMNRRADRTSKITFKHQIVIWWAGLMRGAVSIALAFKQFTFSGVTSDPVNATMVTNTIIVVLFSTLVFGFLTKPLIRYLLPHHATRKNNGHEESGPHPEDMNLPFLSLEESTETNLSRAKESLSMFIESPVYTMHYYWRSFDDSYMRPIFGGPRANFHNANTANHGHLSNVV* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0611 490 PRINTS Na+/H+ exchanger signature 35 46 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lan19g0611 490 PRINTS Na+/H+ exchanger signature 49 63 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lan19g0611 490 PRINTS Na+/H+ exchanger signature 64 72 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lan19g0611 490 PRINTS Na+/H+ exchanger signature 104 114 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lan19g0611 490 PANTHER SODIUM/HYDROGEN EXCHANGER 6 474 IPR018422 GO:0006812|GO:0015299|GO:0016021
Lan19g0611 490 PANTHER SODIUM/HYDROGEN EXCHANGER 6 474 - -
Lan19g0611 490 Gene3D - 96 148 - -
Lan19g0611 490 Pfam Sodium/hydrogen exchanger family 5 394 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0611 Lan-Chr19 11439742 11452430 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0611 6 472 Antiporters AT5G55470 71.125 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0611 - - gmx:100813332 762.681